C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L26, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122220 Rpl26-ps5-001 ENSMUSG00000081125 10090 + 2:142570508-142570946 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartENSMUST00000122220
Transcript ID Breast Heart
ENSMUST00000122220 0.303±0.00 0.120±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002DG CIL_0002DG_0002 CGP 2:140650914-142901531

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000293842 RPL26-001 protein_coding Homo_sapiens 0 448
ENST00000414397 RP11-524O24.2-001 processed_pseudogene Homo_sapiens 0 307
ENST00000424037 RP11-416L21.1-001 processed_pseudogene Homo_sapiens 0 337
ENST00000431047 AC005534.6-001 processed_pseudogene Homo_sapiens 0 388
ENST00000450941 AC022431.1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000451325 RP11-445P17.5-001 processed_pseudogene Homo_sapiens 0 313
ENST00000472981 RP11-796G6.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000481064 RPL26P35-001 processed_pseudogene Homo_sapiens 0 231
ENST00000490836 CTD-2555K7.1-001 processed_pseudogene Homo_sapiens 0 326
ENST00000495104 RP11-366M4.2-001 processed_pseudogene Homo_sapiens 0 388
ENST00000495560 AC090453.1-001 processed_pseudogene Homo_sapiens 0 255
ENST00000578115 RPL26-002 retained_intron Homo_sapiens 0 204
ENST00000578812 RPL26-003 protein_coding Homo_sapiens 0 331
ENST00000582471 KRBA2-001 nonsense_mediated_decay Homo_sapiens 0 331
ENST00000582485 RPL26-013 protein_coding Homo_sapiens 0 361
ENST00000582556 RPL26-005 protein_coding Homo_sapiens 0 448
ENST00000583011 RPL26-007 protein_coding Homo_sapiens 0 448
ENST00000583515 RPL26-006 protein_coding Homo_sapiens 0 307
ENST00000584164 RPL26-004 protein_coding Homo_sapiens 0 448
ENST00000584343 RPL26-008 protein_coding Homo_sapiens 0 348
ENST00000584906 RPL26-010 nonsense_mediated_decay Homo_sapiens 0 202

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