C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMT3 suppressor of mif two 3 homolog 2, pseudogene 2 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122370 Smt3h2-ps2-001 ENSMUSG00000074184 10090 + 7:127397978-127398265 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungPlacentaTestisENSMUST00000122370
Transcript ID Brain Lung Placenta Testis
ENSMUST00000122370 0.327±0.00 0.487±0.00 0.240±0.00 0.827±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000U5 CIL_0000U5_0004 CGP 7:127389673-127406822

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 228
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 0 222
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 401
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 305
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 346
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 326
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 0.00000000001 73
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 357
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 1e-35 152
ENST00000518873 SUMO2P18-001 processed_pseudogene Homo_sapiens 0.000001 57
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 318
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 396
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 0 222
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 381

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