C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO2 pseudogene 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000518873 SUMO2P18-001 ENSG00000253639 9606 - 8:97858049-97858947 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastENST00000518873
Transcript ID Brain Breast
ENST00000518873 0.054±0.00 0.156±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KV CIL_0001KV_0001 CGP 8:97775057-98036716

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122297 Gm12755-001 unprocessed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000122370 Smt3h2-ps2-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000117132 Gm9836-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000121084 Smt3h2-ps-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000121569 Smt3h2-ps4-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000117664 Gm10241-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000097581 Gm10540-201 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000117715 Gm11971-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000121366 Gm13430-001 processed_pseudogene Mus_musculus 0.000001 57
ENSMUST00000050672 Sumo2-005 retained_intron Mus_musculus 0.000001 57
ENSMUST00000140844 Sumo2-006 retained_intron Mus_musculus 0.000001 57
ENSMUST00000153892 Sumo2-001 protein_coding Mus_musculus 0.000001 57
ENSMUST00000021084 Sumo2-002 nonsense_mediated_decay Mus_musculus 0.000001 57
ENSMUST00000118155 Sumo2-007 protein_coding Mus_musculus 0.000001 57
ENSMUST00000117589 Sumo2-004 protein_coding Mus_musculus 0.000001 57
ENSMUST00000121185 Sumo2-003 protein_coding Mus_musculus 0.000001 57

Loading