C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000536192 RP1-241P17.4-001 ENSG00000228532 9606 - X:115718942-115719229 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLungMuscleOvaryPlacentaENST00000536192
Transcript ID Brain Colon Kidney Lung Muscle Ovary Placenta
ENST00000536192 0.439±0.03 0.329±0.00 0.103±0.00 0.165±0.00 0.046±0.00 0.543±0.46 0.166±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117664 Gm10241-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000153892 Sumo2-001 protein_coding Mus_musculus 0 457
ENSMUST00000121569 Smt3h2-ps4-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000118989 Gm13690-001 processed_pseudogene Mus_musculus 0 444
ENSMUST00000119738 Gm12335-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000021084 Sumo2-002 nonsense_mediated_decay Mus_musculus 0 436
ENSMUST00000117589 Sumo2-004 protein_coding Mus_musculus 0 431
ENSMUST00000121185 Sumo2-003 protein_coding Mus_musculus 0 424
ENSMUST00000121366 Gm13430-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000117715 Gm11971-001 processed_pseudogene Mus_musculus 0 412
ENSMUST00000121084 Smt3h2-ps-001 processed_pseudogene Mus_musculus 0 403
ENSMUST00000122370 Smt3h2-ps2-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000097581 Gm10540-201 processed_pseudogene Mus_musculus 0 396
ENSMUST00000122297 Gm12755-001 unprocessed_pseudogene Mus_musculus 0 385
ENSMUST00000140844 Sumo2-006 retained_intron Mus_musculus 0 361
ENSMUST00000120751 Gm11556-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000120621 Gm12721-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000119430 Samd8-003 protein_coding Mus_musculus 0 307
ENSMUST00000050672 Sumo2-005 retained_intron Mus_musculus 0 268
ENSMUST00000118155 Sumo2-007 protein_coding Mus_musculus 0 267
ENSMUST00000117132 Gm9836-001 processed_pseudogene Mus_musculus 0 261

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