C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000404494 RP3-509I19.6-001 ENSG00000220600 9606 - 6:138879043-138879319 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartOvaryENST00000404494
Transcript ID Adrenal Heart Ovary
ENST00000404494 0.187±0.00 0.664±0.00 0.117±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121569 Smt3h2-ps4-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000117664 Gm10241-001 processed_pseudogene Mus_musculus 0 261
ENSMUST00000153892 Sumo2-001 protein_coding Mus_musculus 0 261
ENSMUST00000117589 Sumo2-004 protein_coding Mus_musculus 0 261
ENSMUST00000121185 Sumo2-003 protein_coding Mus_musculus 0 261
ENSMUST00000118989 Gm13690-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000117715 Gm11971-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000121366 Gm13430-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000121084 Smt3h2-ps-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000021084 Sumo2-002 nonsense_mediated_decay Mus_musculus 0 246
ENSMUST00000122297 Gm12755-001 unprocessed_pseudogene Mus_musculus 0 239
ENSMUST00000122370 Smt3h2-ps2-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000097581 Gm10540-201 processed_pseudogene Mus_musculus 0 217
ENSMUST00000140844 Sumo2-006 retained_intron Mus_musculus 0 200
ENSMUST00000120751 Gm11556-001 processed_pseudogene Mus_musculus 3e-38 161
ENSMUST00000119430 Samd8-003 protein_coding Mus_musculus 3e-37 158
ENSMUST00000117132 Gm9836-001 processed_pseudogene Mus_musculus 1e-31 139
ENSMUST00000050672 Sumo2-005 retained_intron Mus_musculus 1e-31 139
ENSMUST00000118155 Sumo2-007 protein_coding Mus_musculus 1e-31 139

Loading