C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-antigen, retina and pineal gland (arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128761 Sag-003 ENSMUSG00000056055 10090 + 1:87803680-87835396 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000128761
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000128761 0.290±0.00 0.202±0.06 0.133±0.00 0.132±0.08 0.184±0.01 0.132±0.04 0.217±0.00 0.094±0.04 0.248±0.06 0.051±0.03 0.235±0.08 0.059±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L2 CIL_0004L2_0003 CGP 1:87755870-87845158
CIL_0003RA CIL_0003RA_0002 CGP 1:87803680-87945180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409110 SAG-001 protein_coding Homo_sapiens 0 1011
ENST00000412969 SAG-005 retained_intron Homo_sapiens 0 483
ENST00000447536 SAG-007 protein_coding Homo_sapiens 0 520
ENST00000453143 SAG-016 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0 483
ENST00000471884 SAG-004 retained_intron Homo_sapiens 0 531
ENST00000474206 SAG-009 processed_transcript Homo_sapiens 0 422
ENST00000476500 SAG-003 retained_intron Homo_sapiens 2e-37 163
ENST00000479450 SAG-014 processed_transcript Homo_sapiens 0.000000000002 75

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