C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 188, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129993 Fam188a-007 ENSMUSG00000026767 10090 - 2:12386607-12419448 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000129993
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000129993 29.284±2.69 65.281±23.99 39.873±0.00 33.552±4.67 40.410±11.90 8.072±1.86 35.152±11.60 22.039±3.19 42.524±3.86 15.902±7.97 22.163±1.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088I CIL_00088I_0002 VISTA 2:11765185-12368019
CIL_0002HM CIL_0002HM_0002 CGP 2:12106632-12419469
CIL_0002HH CIL_0002HH_0002 CGP 2:12347263-13003453

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277632 FAM188A-001 protein_coding Homo_sapiens 0 263
ENST00000378036 FAM188A-003 protein_coding Homo_sapiens 2e-39 169
ENST00000418767 FAM188A-006 protein_coding Homo_sapiens 0 263
ENST00000436829 FAM188A-005 protein_coding Homo_sapiens 0 263
ENST00000477891 FAM188A-002 processed_transcript Homo_sapiens 0 263

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