C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-antigen, retina and pineal gland (arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000130886 Sag-002 ENSMUSG00000056055 10090 + 1:87803680-87825300 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000130886
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000130886 0.136±0.03 0.181±0.00 0.448±0.00 0.129±0.05 0.059±0.00 0.093±0.00 0.116±0.00 0.167±0.14 0.069±0.04 0.322±0.19 0.348±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L2 CIL_0004L2_0003 CGP 1:87755870-87845158
CIL_0003RA CIL_0003RA_0002 CGP 1:87803680-87945180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409110 SAG-001 protein_coding Homo_sapiens 0 776
ENST00000412969 SAG-005 retained_intron Homo_sapiens 0 248
ENST00000447536 SAG-007 protein_coding Homo_sapiens 0 520
ENST00000453143 SAG-016 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0 248
ENST00000471884 SAG-004 retained_intron Homo_sapiens 0 531
ENST00000474206 SAG-009 processed_transcript Homo_sapiens 0 422
ENST00000476500 SAG-003 retained_intron Homo_sapiens 2e-37 163
ENST00000479450 SAG-014 processed_transcript Homo_sapiens 0.000000000002 75

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