C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: stromal antigen 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133388 Stag1-011 ENSMUSG00000037286 10090 + 9:100643770-100776795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000133388
Transcript ID Testis
ENSMUST00000133388 35.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C8 CIL_0001C8_0002 CGP 9:100552188-100959375
CIL_0000WP CIL_0000WP_0002 CGP 9:100597798-101034898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0003682 IDA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236698 STAG1-002 protein_coding Homo_sapiens 0 691
ENST00000383202 STAG1-001 protein_coding Homo_sapiens 0 691
ENST00000434713 STAG1-201 protein_coding Homo_sapiens 0 691
ENST00000462818 STAG1-008 retained_intron Homo_sapiens 0 453
ENST00000480733 STAG1-005 protein_coding Homo_sapiens 0 691
ENST00000483235 STAG1-003 nonsense_mediated_decay Homo_sapiens 0 460
ENST00000487065 STAG1-004 nonsense_mediated_decay Homo_sapiens 0 460

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