C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | scaffold attachment factor B2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000133604  |
Safb2-004 |
ENSMUSG00000042625 |
10090 | - |
17:56568991-56584524  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0003JF | CIL_0003JF_0002 | CGP | 17:56511248-56584585 |
| CIL_0003UZ | CIL_0003UZ_0002 | CGP | 17:56560965-56606294 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0008150 | ND | biological_process |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000252542
|
SAFB2-001 | protein_coding | Homo_sapiens | 0 | 508 |
|
ENST00000292123
|
SAFB-003 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000454510
|
SAFB-004 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000588852
|
SAFB-002 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000589863
|
SAFB-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 327 |
|
ENST00000592224
|
SAFB-001 | protein_coding | Homo_sapiens | 0 | 327 |
|
ENST00000592599
|
SAFB2-003 | retained_intron | Homo_sapiens | 0 | 244 |
|
ENST00000592707
|
SAFB-009 | retained_intron | Homo_sapiens | 0 | 307 |
