C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: scaffold attachment factor B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592599 SAFB2-003 ENSG00000130254 9606 - 19:5600200-5612473 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyENST00000592599
Transcript ID Kidney
ENST00000592599 1.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JF CIL_0003JF_0001 CGP 19:5455431-5624046
CIL_0003UZ CIL_0003UZ_0001 CGP 19:5586999-5668478

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134741 Safb2-005 retained_intron Mus_musculus 0 532
ENSMUST00000182378 Safb-004 retained_intron Mus_musculus 0 396
ENSMUST00000095224 Safb-001 protein_coding Mus_musculus 0 261
ENSMUST00000182533 Safb-006 protein_coding Mus_musculus 0 261
ENSMUST00000133604 Safb2-004 nonsense_mediated_decay Mus_musculus 0 244
ENSMUST00000075510 Safb2-001 protein_coding Mus_musculus 0 244

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