C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003UZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130254-ENSG00000160633 CGP 9606 19:5586999-5668478
GeneTranscriptPositionBiotype
ENSG00000130254 (SAFB2)
scaffold attachment factor B2 		ENST00000252542 (SAFB2-001) 5586999-5622980 protein_coding
ENST00000585449 (SAFB2-011) 5598485-5600172 retained_intron
ENST00000587802 (SAFB2-010) 5587110-5589020 processed_transcript
ENST00000589925 (SAFB2-008) 5587868-5593705 processed_transcript
ENST00000590000 (SAFB2-009) 5591296-5592881 retained_intron
ENST00000590262 (SAFB2-004) 5612520-5624046 protein_coding
ENST00000591101 (SAFB2-007) 5600214-5610235 retained_intron
ENST00000591120 (SAFB2-002) 5611876-5622776 nonsense_mediated_decay
ENST00000591123 (SAFB2-005) 5598832-5616278 nonsense_mediated_decay
ENST00000591310 (SAFB2-006) 5600226-5610611 processed_transcript
ENST00000592599 (SAFB2-003) 5600200-5612473 retained_intron
ENSG00000160633 (SAFB)
scaffold attachment factor B 		ENST00000292123 (SAFB-003) 5623099-5668478 protein_coding
ENST00000454510 (SAFB-004) 5623139-5668327 protein_coding
ENST00000586281 (SAFB-012) 5664129-5664762 retained_intron
ENST00000586934 (SAFB-006) 5623121-5653242 processed_transcript
ENST00000588852 (SAFB-002) 5623153-5668326 protein_coding
ENST00000589006 (SAFB-011) 5657325-5664136 protein_coding
ENST00000589863 (SAFB-005) 5623035-5668349 nonsense_mediated_decay
ENST00000590485 (SAFB-007) 5641851-5648404 retained_intron
ENST00000591666 (SAFB-008) 5623083-5648187 retained_intron
ENST00000591991 (SAFB-014) 5664726-5668471 retained_intron
ENST00000592224 (SAFB-001) 5623118-5668466 protein_coding
ENST00000592396 (SAFB-010) 5649684-5653420 retained_intron
ENST00000592555 (SAFB-013) 5666656-5668478 retained_intron
ENST00000592707 (SAFB-009) 5648855-5653264 retained_intron
CIL_0003UZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042625-ENSMUSG00000071054 CGP 10090 17:56560965-56606294
GeneTranscriptPositionBiotype
ENSMUSG00000042625 (Safb2)
scaffold attachment factor B2 		ENSMUST00000075510 (Safb2-001) 56562939-56584585 protein_coding
ENSMUST00000124111 (Safb2-007) 56560973-56564567 protein_coding
ENSMUST00000124457 (Safb2-011) 56568895-56575097 retained_intron
ENSMUST00000127947 (Safb2-013) 56567533-56569434 retained_intron
ENSMUST00000131056 (Safb2-014) 56565997-56571438 protein_coding
ENSMUST00000133604 (Safb2-004) 56568991-56584524 nonsense_mediated_decay
ENSMUST00000134497 (Safb2-012) 56571026-56571677 retained_intron
ENSMUST00000134741 (Safb2-005) 56570081-56575519 retained_intron
ENSMUST00000140037 (Safb2-010) 56576331-56583046 retained_intron
ENSMUST00000142752 (Safb2-017) 56560965-56564516 protein_coding
ENSMUST00000142940 (Safb2-006) 56562939-56567015 protein_coding
ENSMUST00000144255 (Safb2-003) 56562939-56584512 nonsense_mediated_decay
ENSMUST00000146070 (Safb2-008) 56578873-56584511 retained_intron
ENSMUST00000146958 (Safb2-009) 56576460-56584301 retained_intron
ENSMUST00000154991 (Safb2-015) 56563305-56567018 protein_coding
ENSMUST00000155983 (Safb2-002) 56571268-56584562 nonsense_mediated_decay
ENSMUST00000156640 (Safb2-016) 56562949-56572498 processed_transcript
ENSMUSG00000071054 (Safb)
scaffold attachment factor B 		ENSMUST00000095224 (Safb-001) 56585059-56606294 protein_coding
ENSMUST00000182031 (Safb-002) 56584825-56596523 retained_intron
ENSMUST00000182159 (Safb-003) 56594514-56596511 retained_intron
ENSMUST00000182378 (Safb-004) 56597770-56606280 retained_intron
ENSMUST00000182454 (Safb-005) 56605222-56606294 retained_intron
ENSMUST00000182461 (Safb-009) 56602970-56604543 retained_intron
ENSMUST00000182533 (Safb-006) 56584974-56606219 protein_coding
ENSMUST00000182800 (Safb-011) 56584982-56593720 protein_coding
ENSMUST00000182913 (Safb-007) 56604359-56605653 retained_intron
ENSMUST00000182951 (Safb-012) 56588840-56601240 nonsense_mediated_decay
ENSMUST00000183041 (Safb-010) 56601397-56604408 retained_intron
ENSMUST00000183318 (Safb-008) 56605740-56606274 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UZ_0001ENSG00000130254ENST00000252542ENST00000585449ENST00000587802ENST00000589925ENST00000590000ENST00000590262ENST00000591101ENST00000591120ENST00000591123ENST00000591310ENST00000592599ENSG00000160633ENST00000292123ENST00000454510ENST00000586281ENST00000586934ENST00000588852ENST00000589006ENST00000589863ENST00000590485ENST00000591666ENST00000591991ENST00000592224ENST00000592396ENST00000592555ENST00000592707CIL_0003UZ_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003UZ_0001ENSG00000130254ENST00000252542ENST00000587802ENST00000589925ENST00000591101ENST00000591120ENST00000591123ENST00000592599ENSG00000160633ENST00000292123ENST00000586934ENST00000588852ENST00000591991ENST00000592224CIL_0003UZ_0002ENSMUSG00000042625ENSMUST00000075510ENSMUST00000124111ENSMUST00000124457ENSMUST00000134741ENSMUST00000140037ENSMUST00000142940ENSMUST00000144255ENSMUST00000146070ENSMUST00000146958ENSMUST00000154991ENSMUST00000156640ENSMUSG00000071054ENSMUST00000095224ENSMUST00000182031ENSMUST00000182378ENSMUST00000182533ENSMUST00000182951ENSMUST00000183041ENSMUST00000183318
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130254 ENST00000252542 15.578±0.00 24.341±0.00 4.600±0.00 12.009±11.13 5.389±4.57 12.519±0.00 4.285±4.14 3.054±2.07 3.470±1.89 6.588±0.00 4.982±4.42 18.011±5.36 9.848±2.83 23.187±1.31
ENST00000585449 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587802 N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.920±0.00 N/A N/A N/A N/A
ENST00000589925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.954±0.00 N/A N/A N/A
ENST00000590000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591101 N/A N/A N/A 6.077±0.00 12.187±0.00 17.581±0.00 N/A 15.124±0.00 16.071±0.00 10.426±0.00 7.988±0.00 N/A N/A N/A
ENST00000591120 N/A N/A 11.181±0.00 1.887±0.00 N/A 6.772±0.00 0.678±0.00 2.253±0.00 2.534±0.00 4.932±0.00 N/A N/A N/A N/A
ENST00000591123 N/A N/A N/A N/A N/A N/A 7.391±0.00 N/A N/A N/A 4.495±0.00 N/A N/A 16.281±0.00
ENST00000591310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592599 N/A N/A N/A N/A N/A N/A N/A 1.051±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000160633 ENST00000292123 9.555±0.00 8.558±0.00 N/A N/A 4.750±0.00 N/A N/A 0.659±0.00 N/A N/A N/A 11.054±2.44 7.152±2.39 7.792±0.00
ENST00000454510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586934 N/A N/A N/A N/A N/A N/A 2.102±0.00 N/A 4.204±0.00 3.106±0.00 N/A N/A N/A N/A
ENST00000588852 17.642±0.00 14.005±0.00 3.896±0.00 15.156±13.33 11.919±0.00 11.866±10.91 8.071±0.00 19.457±0.00 1.747±0.00 8.777±7.25 18.854±0.00 6.423±5.49 15.866±0.00 24.961±11.75
ENST00000589006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590485 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591991 N/A N/A N/A N/A 0.897±0.00 1.106±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592224 12.654±0.00 14.208±0.00 N/A 9.527±0.00 5.319±4.00 9.924±0.00 9.950±0.00 4.927±1.92 2.204±0.00 2.416±0.00 N/A 22.992±1.99 19.171±3.51 16.268±0.00
ENST00000592396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592555 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042625 ENSMUST00000075510 7.104±1.88 7.232±0.72 15.031±3.46 17.152±7.02 8.742±2.14 11.086±1.81 4.366±1.04 8.957±0.80 11.498±6.68 19.179±5.67 6.135±1.50 26.464±11.60 15.726±4.36 24.085±3.61
ENSMUST00000124111 N/A 3.791±0.24 N/A 2.623±0.00 4.159±1.68 4.468±0.00 1.783±0.08 N/A N/A N/A N/A 7.737±2.14 N/A N/A
ENSMUST00000124457 N/A N/A N/A 95.928±0.00 N/A N/A N/A N/A N/A N/A N/A 210.809±0.00 91.326±19.02 140.316±0.00
ENSMUST00000127947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133604 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134741 5.269±1.70 N/A N/A 5.487±1.47 4.062±0.89 N/A 2.658±0.31 N/A 4.330±0.02 N/A 3.106±0.40 N/A 10.971±0.16 N/A
ENSMUST00000140037 10.647±2.49 N/A N/A N/A N/A N/A 3.974±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142940 N/A N/A N/A N/A N/A N/A N/A 8.414±0.46 4.581±0.74 N/A N/A N/A N/A N/A
ENSMUST00000144255 4.025±0.67 5.775±0.65 N/A N/A N/A 5.977±0.75 3.630±0.69 4.328±0.37 3.866±0.00 6.554±0.00 N/A 11.042±1.56 N/A 8.185±0.00
ENSMUST00000146070 N/A N/A N/A 136.954±0.00 N/A N/A N/A N/A N/A N/A N/A 356.780±0.00 129.656±34.02 247.244±0.00
ENSMUST00000146958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.959±0.00 N/A N/A
ENSMUST00000154991 N/A N/A N/A 39.264±19.86 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156640 N/A 36.050±3.95 N/A N/A 39.791±15.63 40.635±6.88 17.298±0.00 25.145±3.15 20.804±6.01 54.943±7.85 N/A 41.977±0.55 N/A N/A
ENSMUSG00000071054 ENSMUST00000095224 6.957±0.49 2.631±0.00 11.923±4.71 35.195±19.38 4.353±0.30 5.203±0.76 6.162±0.78 5.855±2.25 11.091±9.55 7.783±0.84 6.605±1.24 17.667±24.41 28.135±19.04 24.266±29.35
ENSMUST00000182031 N/A 9.097±1.70 N/A N/A 3.896±0.00 N/A N/A N/A N/A 8.140±0.00 N/A 10.660±2.60 N/A N/A
ENSMUST00000182159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182378 6.694±2.89 8.460±1.72 7.824±3.26 12.893±4.43 6.530±1.23 6.116±1.96 4.872±0.42 4.662±0.46 4.099±1.16 9.744±0.44 2.993±0.40 10.683±2.27 5.656±1.75 7.745±0.71
ENSMUST00000182454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182533 4.612±1.63 N/A 3.706±0.37 6.760±0.54 6.335±0.00 4.374±0.00 3.098±0.00 3.421±0.60 3.915±1.53 5.631±0.79 3.095±0.68 10.224±3.52 6.689±3.01 7.231±0.43
ENSMUST00000182800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182951 N/A N/A N/A 140.491±0.00 N/A N/A N/A N/A N/A N/A N/A 170.047±0.00 101.261±28.08 155.208±0.00
ENSMUST00000183041 N/A N/A N/A 254.062±0.00 N/A N/A N/A N/A N/A N/A N/A 170.261±148.48 183.127±42.34 N/A
ENSMUST00000183318 26.448±5.99 41.278±9.48 N/A N/A 33.614±7.84 34.837±8.52 N/A 26.437±3.13 N/A N/A N/A 43.472±3.23 N/A N/A

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