C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S-antigen, retina and pineal gland (arrestin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136708 Sag-007 ENSMUSG00000056055 10090 + 1:87820707-87824469 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleOvaryPlacentaENSMUST00000136708
Transcript ID Brain Colon Heart Muscle Ovary Placenta
ENSMUST00000136708 1.161±0.00 0.176±0.00 0.090±0.00 0.089±0.00 0.346±0.00 0.488±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004L2 CIL_0004L2_0003 CGP 1:87755870-87845158
CIL_0003RA CIL_0003RA_0002 CGP 1:87803680-87945180

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409110 SAG-001 protein_coding Homo_sapiens 0 305
ENST00000412969 SAG-005 retained_intron Homo_sapiens 0 217
ENST00000469222 SAG-006 retained_intron Homo_sapiens 0 217
ENST00000471884 SAG-004 retained_intron Homo_sapiens 0 217
ENST00000474206 SAG-009 processed_transcript Homo_sapiens 0 252
ENST00000476500 SAG-003 retained_intron Homo_sapiens 2e-37 163

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