C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 7-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137387 Atxn7l3-003 ENSMUSG00000059995 10090 - 11:102289300-102294987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000137387
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000137387 5.533±0.99 5.183±0.41 5.610±1.00 22.178±1.24 5.562±1.29 6.355±2.16 3.060±1.43 4.740±2.44 3.652±1.27 7.951±1.01 1.091±0.36 7.940±2.16 6.176±2.90 3.149±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0003L7 CIL_0003L7_0003 CGP 11:102284931-102296631
CIL_0004D4 CIL_0004D4_0003 CGP 11:102289300-102319742

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104118 atxn7l3-201 protein_coding Danio_rerio 0 383
ENST00000311910 RP11-30M20.1-001 processed_pseudogene Homo_sapiens 0 793
ENST00000389384 ATXN7L3-001 protein_coding Homo_sapiens 0 2784
ENST00000454077 ATXN7L3-003 protein_coding Homo_sapiens 0 2913
ENST00000519948 ATXN7L3B-001 protein_coding Homo_sapiens 6e-33 148
ENST00000587022 ATXN7L3-005 retained_intron Homo_sapiens 0 276
ENST00000587097 ATXN7L3-002 protein_coding Homo_sapiens 0 1254
ENST00000589607 ATXN7L3-007 retained_intron Homo_sapiens 0 326
ENST00000589805 ATXN7L3-011 protein_coding Homo_sapiens 0 630
ENST00000590169 ATXN7L3-004 protein_coding Homo_sapiens 0 667
ENST00000590537 ATXN7L3-006 protein_coding Homo_sapiens 0 475
ENST00000591295 ATXN7L3-009 protein_coding Homo_sapiens 0 2036
ENST00000593073 ATXN7L3-012 processed_transcript Homo_sapiens 0 684

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