C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | stromal antigen 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000138405  |
Stag1-005 |
ENSMUSG00000037286 |
10090 | + |
9:100643616-100867293  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001C8 | CIL_0001C8_0002 | CGP | 9:100552188-100959375 |
| CIL_0000WP | CIL_0000WP_0002 | CGP | 9:100597798-101034898 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000785 | IDA | chromatin |
| GO:0003682 | IDA | chromatin binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000089376
|
stag1b-201 | protein_coding | Danio_rerio | 0 | 289 |
|
ENSDART00000142864
|
stag1b-001 | protein_coding | Danio_rerio | 0 | 289 |
|
ENST00000236698
|
STAG1-002 | protein_coding | Homo_sapiens | 0 | 1663 |
|
ENST00000383202
|
STAG1-001 | protein_coding | Homo_sapiens | 0 | 1650 |
|
ENST00000434713
|
STAG1-201 | protein_coding | Homo_sapiens | 0 | 1663 |
|
ENST00000462818
|
STAG1-008 | retained_intron | Homo_sapiens | 0 | 1151 |
|
ENST00000480733
|
STAG1-005 | protein_coding | Homo_sapiens | 0 | 1312 |
|
ENST00000483235
|
STAG1-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 734 |
|
ENST00000487065
|
STAG1-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 935 |
|
ENST00000492318
|
STAG1-006 | protein_coding | Homo_sapiens | 0 | 198 |
