Transcript ID | Adrenal |
---|---|
ENSMUST00000138934 | 0.495±0.00 |
Transcript Info |
||||||
Description: | sodium channel, voltage-gated, type V, alpha | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000138934 | Scn5a-003 | ENSMUSG00000032511 | 10090 | - | 9:119562537-119563503 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008BE | CIL_0008BE_0002 | VISTA | 9:119196374-119798584 |
CIL_0005VU | CIL_0005VU_0002 | CGP | 9:119444923-119579016 |
CIL_0004RF | CIL_0004RF_0002 | CGP | 9:119483408-119719032 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001518 | IC | voltage-gated sodium channel complex |
GO:0003231 | IMP | cardiac ventricle development |
GO:0005248 | IDA | voltage-gated sodium channel activity |
GO:0005515 | IPI | protein binding |
GO:0005886 | IDA | plasma membrane |
GO:0006814 | IDA | sodium ion transport |
GO:0014070 | IMP | response to organic cyclic compound |
GO:0014704 | IDA | intercalated disc |
GO:0019228 | IBA | neuronal action potential |
GO:0030315 | IDA | T-tubule |
GO:0034706 | IPI | sodium channel complex |
GO:0035725 | IDA | sodium ion transmembrane transport |
GO:0086004 | IMP | regulation of cardiac muscle cell contraction |
GO:0086006 | IMP | voltage-gated sodium channel activity involved in cardiac muscle cell action potential |
GO:0086012 | IMP | membrane depolarization during cardiac muscle cell action potential |
GO:0086046 | IMP | membrane depolarization during SA node cell action potential |
GO:0086063 | IMP | voltage-gated sodium channel activity involved in SA node cell action potential |
GO:0086091 | IMP | regulation of heart rate by cardiac conduction |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000327956 | SCN5A-006 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000333535 | SCN5A-014 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000413689 | SCN5A-001 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000414099 | SCN5A-004 | protein_coding | Homo_sapiens | 4.2039e-45 | 189 |
ENST00000423572 | SCN5A-003 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000425664 | SCN5A-201 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000443581 | SCN5A-202 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000450102 | SCN5A-008 | protein_coding | Homo_sapiens | 2.8026e-45 | 189 |
ENST00000451551 | SCN5A-203 | protein_coding | Homo_sapiens | 0 | 196 |
ENST00000455624 | SCN5A-002 | protein_coding | Homo_sapiens | 4e-39 | 169 |
ENST00000491944 | SCN5A-005 | retained_intron | Homo_sapiens | 0 | 196 |
ENST00000612060 | SCN5A-204 | protein_coding | Homo_sapiens | 0 | 189 |