C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prenyl (solanesyl) diphosphate synthase, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139472 Pdss1-003 ENSMUSG00000026784 10090 + 2:22934123-22940255 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000139472
Transcript ID Brain
ENSMUST00000139472 8.322±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266
CIL_0000R7 CIL_0000R7_0002 CGP 2:22895522-23040241

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346832 ABI1-201 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000359188 ABI1-007 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376137 ABI1-202 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376138 ABI1-001 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376139 ABI1-009 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376142 ABI1-005 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376160 ABI1-004 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376166 ABI1-003 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376170 ABI1-002 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000376215 PDSS1-001 protein_coding Homo_sapiens 0 569
ENST00000470978 PDSS1-003 processed_transcript Homo_sapiens 0 568
ENST00000490841 ABI1-203 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000491711 PDSS1-002 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000536334 ABI1-204 protein_coding Homo_sapiens 2.99878e-43 182

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