C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139679 Kdm4b-004 ENSMUSG00000024201 10090 + 17:56326062-56356056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyLiverLungOvaryPlacentaENSMUST00000139679
Transcript ID Adrenal Brain Kidney Liver Lung Ovary Placenta
ENSMUST00000139679 16.764±3.59 14.431±0.00 4.636±0.00 2.475±0.38 8.118±0.00 13.935±4.52 7.194±1.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GV CIL_0005GV_0003 CGP 17:56303321-56402870
CIL_0005ON CIL_0005ON_0002 CGP 17:56326062-56476483

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000034084 kdm4b-201 protein_coding Danio_rerio 0 387
ENSDART00000128161 kdm4b-001 protein_coding Danio_rerio 0 387
ENST00000335080 KDM4D-001 protein_coding Homo_sapiens 0 233
ENST00000372396 KDM4A-001 protein_coding Homo_sapiens 0 316
ENST00000450979 KDM4E-001 protein_coding Homo_sapiens 0 243
ENST00000463151 KDM4A-002 processed_transcript Homo_sapiens 0 316
ENST00000485249 KDM4A-003 processed_transcript Homo_sapiens 0 296
ENST00000536741 KDM4D-002 protein_coding Homo_sapiens 0 233
ENST00000545950 RP11-735A19.2-001 unprocessed_pseudogene Homo_sapiens 0 231
ENST00000610872 KDM4D-201 protein_coding Homo_sapiens 0 233

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