C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: lysine (K)-specific demethylase 4A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485249 KDM4A-003 ENSG00000066135 9606 + 1:43653306-43667021 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleOvaryENST00000485249
Transcript ID Bladder Muscle Ovary
ENST00000485249 2.568±0.00 2.016±0.00 4.298±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B7 CIL_0005B7_0002 CGP 1:43525187-43705515
CIL_0005B8 CIL_0005B8_0002 CGP 1:43650158-43931165

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050288 Kdm4a-003 protein_coding Mus_musculus 0 885
ENSMUST00000106403 Kdm4a-005 protein_coding Mus_musculus 0 885
ENSMUST00000097911 Kdm4a-002 protein_coding Mus_musculus 0 885
ENSMUST00000106406 Kdm4a-001 protein_coding Mus_musculus 0 885
ENSDART00000065583 KDM4A (1 of 2)-201 protein_coding Danio_rerio 0 420
ENSDART00000151359 KDM4A (1 of 2)-001 protein_coding Danio_rerio 0 420
ENSMUST00000086835 Kdm4b-002 protein_coding Mus_musculus 0 407
ENSMUST00000025036 Kdm4b-001 protein_coding Mus_musculus 0 407
ENSDART00000034084 kdm4b-201 protein_coding Danio_rerio 0 370
ENSDART00000128161 kdm4b-001 protein_coding Danio_rerio 0 370
ENSMUST00000139679 Kdm4b-004 protein_coding Mus_musculus 0 296

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