C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein L10A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141049 Rpl10a-007 ENSMUSG00000037805 10090 + 17:28329278-28331027 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000141049
Transcript ID Breast Ovary
ENSMUST00000141049 11.830±0.00 11.952±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UQ CIL_0008UQ_0002 VISTA 17:28043766-28646334
CIL_0002L9 CIL_0002L9_0003 CGP 17:28313530-28331032
CIL_0002EP CIL_0002EP_0002 CGP 17:28328471-28350805

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322203 RPL10A-001 protein_coding Homo_sapiens 0 398
ENST00000392713 RP1-228H13.2-001 processed_pseudogene Homo_sapiens 0 303
ENST00000426688 RP3-445O10.1-001 processed_pseudogene Homo_sapiens 6e-38 161
ENST00000464112 RPL10A-002 processed_transcript Homo_sapiens 0 398
ENST00000467020 RPL10A-005 processed_transcript Homo_sapiens 0 398
ENST00000472730 RPL10AP6-001 processed_pseudogene Homo_sapiens 1e-35 154
ENST00000478340 RPL10A-004 processed_transcript Homo_sapiens 0 398
ENST00000479243 RPL10AP2-001 processed_pseudogene Homo_sapiens 0 381
ENST00000486625 CTD-2161E19.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000490335 RPL10A-003 processed_transcript Homo_sapiens 0 270

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