C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 25, member 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000142097  |
Slc25a39-014 |
ENSMUSG00000018677 |
10090 | - |
11:102404062-102407487  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0002 | VISTA | 11:102063033-102664797 |
| CIL_0007ST | CIL_0007ST_0002 | VISTA | 11:102292756-102896210 |
| CIL_0005J9 | CIL_0005J9_0002 | CGP | 11:102393403-102407946 |
| CIL_0005J8 | CIL_0005J8_0002 | CGP | 11:102402985-102437048 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005739 | IDA | mitochondrion |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000225308
|
SLC25A39-001 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000377095
|
SLC25A39-006 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000537904
|
SLC25A39-005 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000585695
|
SLC25A39-003 | retained_intron | Homo_sapiens | 1e-37 | 161 |
|
ENST00000586016
|
SLC25A39-008 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000588049
|
SLC25A39-012 | protein_coding | Homo_sapiens | 9e-38 | 161 |
|
ENST00000588315
|
SLC25A39-002 | retained_intron | Homo_sapiens | 1e-37 | 161 |
|
ENST00000588767
|
SLC25A39-015 | protein_coding | Homo_sapiens | 0 | 359 |
|
ENST00000590194
|
SLC25A39-007 | protein_coding | Homo_sapiens | 0 | 427 |
|
ENST00000591006
|
SLC25A39-004 | retained_intron | Homo_sapiens | 2e-37 | 161 |
|
ENST00000593166
|
SLC25A39-016 | nonsense_mediated_decay | Homo_sapiens | 6e-24 | 115 |
