C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | solute carrier family 25, member 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000588049  |
SLC25A39-012 |
ENSG00000013306 |
9606 | - |
17:44321434-44324818  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0001 | VISTA | 17:43966083-44567774 |
| CIL_0007ST | CIL_0007ST_0001 | VISTA | 17:44247434-44848646 |
| CIL_0005J9 | CIL_0005J9_0001 | CGP | 17:44308413-44324870 |
| CIL_0005J8 | CIL_0005J8_0001 | CGP | 17:44319625-44353102 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0006810 | IEA | transport |
| GO:0016021 | IEA | integral component of membrane |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107098
|
Slc25a39-003 | protein_coding | Mus_musculus | 0 | 597 |
|
ENSMUST00000155104
|
Slc25a39-010 | protein_coding | Mus_musculus | 0 | 496 |
|
ENSMUST00000153395
|
Slc25a39-002 | retained_intron | Mus_musculus | 0 | 486 |
|
ENSMUST00000018821
|
Slc25a39-001 | protein_coding | Mus_musculus | 0 | 486 |
|
ENSMUST00000154001
|
Slc25a39-006 | protein_coding | Mus_musculus | 0 | 484 |
|
ENSMUST00000130436
|
Slc25a39-008 | protein_coding | Mus_musculus | 0 | 483 |
|
ENSMUST00000149777
|
Slc25a39-007 | protein_coding | Mus_musculus | 0 | 483 |
|
ENSMUST00000141535
|
Slc25a39-015 | retained_intron | Mus_musculus | 0 | 396 |
|
ENSMUST00000123688
|
Slc25a39-005 | retained_intron | Mus_musculus | 0 | 248 |
|
ENSMUST00000142097
|
Slc25a39-014 | nonsense_mediated_decay | Mus_musculus | 9e-38 | 161 |
|
ENSMUST00000134669
|
Slc25a39-013 | nonsense_mediated_decay | Mus_musculus | 9e-38 | 161 |
