C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN domain containing 3A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000142157 Rundc3a-007 ENSMUSG00000006575 10090 + 11:102399564-102402226 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonMuscleOvaryPlacentaTestisENSMUST00000142157
Transcript ID Adrenal Colon Muscle Ovary Placenta Testis
ENSMUST00000142157 8.867±2.57 2.503±0.82 0.145±0.07 1.000±0.00 0.415±0.00 6.351±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B6 CIL_0009B6_0002 VISTA 11:102063033-102664797
CIL_0007ST CIL_0007ST_0002 VISTA 11:102292756-102896210
CIL_0005JA CIL_0005JA_0002 CGP 11:102348824-102402555
CIL_0005J9 CIL_0005J9_0002 CGP 11:102393403-102407946

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225441 RUNDC3A-002 protein_coding Homo_sapiens 0 758
ENST00000426726 RUNDC3A-001 protein_coding Homo_sapiens 0 1046
ENST00000587483 RUNDC3A-004 retained_intron Homo_sapiens 0 1013
ENST00000588564 RUNDC3A-007 retained_intron Homo_sapiens 0 436
ENST00000590834 RUNDC3A-003 retained_intron Homo_sapiens 0 614
ENST00000590941 RUNDC3A-005 protein_coding Homo_sapiens 0 758
ENST00000593079 RUNDC3A-006 retained_intron Homo_sapiens 0 460
ENST00000612735 RUNDC3A-201 protein_coding Homo_sapiens 0 758

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