C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | ribosomal protein L10A | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000143443  |
Rpl10a-004 |
ENSMUSG00000037805 |
10090 | + |
17:28328647-28329522  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008UQ | CIL_0008UQ_0002 | VISTA | 17:28043766-28646334 |
| CIL_0002L9 | CIL_0002L9_0003 | CGP | 17:28313530-28331032 |
| CIL_0002EP | CIL_0002EP_0002 | CGP | 17:28328471-28350805 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000138427
|
rpl10a-004 | nonsense_mediated_decay | Danio_rerio | 3e-22 | 110 |
|
ENSDART00000141110
|
rpl10a-003 | retained_intron | Danio_rerio | 3e-22 | 110 |
|
ENSDART00000136547
|
rpl10a-002 | processed_transcript | Danio_rerio | 3e-21 | 106 |
|
ENSDART00000062983
|
rpl10a-001 | protein_coding | Danio_rerio | 3e-21 | 106 |
|
ENST00000322203
|
RPL10A-001 | protein_coding | Homo_sapiens | 0 | 244 |
|
ENST00000426688
|
RP3-445O10.1-001 | processed_pseudogene | Homo_sapiens | 8e-37 | 158 |
|
ENST00000464112
|
RPL10A-002 | processed_transcript | Homo_sapiens | 0 | 263 |
|
ENST00000467020
|
RPL10A-005 | processed_transcript | Homo_sapiens | 0 | 420 |
|
ENST00000472730
|
RPL10AP6-001 | processed_pseudogene | Homo_sapiens | 0 | 219 |
|
ENST00000478340
|
RPL10A-004 | processed_transcript | Homo_sapiens | 0 | 566 |
|
ENST00000490335
|
RPL10A-003 | processed_transcript | Homo_sapiens | 3.00004e-41 | 172 |
