C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: serine/arginine-rich splicing factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151036 Srsf5-007 ENSMUSG00000021134 10090 + 12:80946376-80950497 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002M1 CIL_0002M1_0002 CGP 12:80790532-80950507
CIL_0000U3 CIL_0000U3_0002 CGP 12:80945504-80968079

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394366 SRSF5-005 protein_coding Homo_sapiens 0 935
ENST00000553369 SRSF5-018 protein_coding Homo_sapiens 0 363
ENST00000553521 SRSF5-003 protein_coding Homo_sapiens 0 968
ENST00000553548 SRSF5-016 protein_coding Homo_sapiens 0 239
ENST00000553635 SRSF5-004 protein_coding Homo_sapiens 0 931
ENST00000554021 SRSF5-010 protein_coding Homo_sapiens 0 363
ENST00000554465 SRSF5-001 retained_intron Homo_sapiens 0 1866
ENST00000554929 SRSF5-008 retained_intron Homo_sapiens 0 900
ENST00000555349 SRSF5-011 protein_coding Homo_sapiens 0 446
ENST00000555547 SRSF5-007 nonsense_mediated_decay Homo_sapiens 0 1496
ENST00000556184 SRSF5-006 retained_intron Homo_sapiens 0 2102
ENST00000556330 SRSF5-014 retained_intron Homo_sapiens 0 468
ENST00000556436 SRSF5-017 retained_intron Homo_sapiens 5e-34 148
ENST00000556587 SRSF5-019 processed_transcript Homo_sapiens 0 970
ENST00000556647 SRSF5-013 processed_transcript Homo_sapiens 0 477
ENST00000557154 SRSF5-002 protein_coding Homo_sapiens 0 963
ENST00000557460 SRSF5-015 retained_intron Homo_sapiens 0 307

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