C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002M1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100647-ENSG00000100650 CGP 9606 14:69611596-69772005
GeneTranscriptPositionBiotype
ENSG00000100647 (KIAA0247)
KIAA0247 		ENST00000342745 (KIAA0247-002) 69611596-69715142 protein_coding
ENST00000553497 (KIAA0247-003) 69611638-69615751 processed_transcript
ENST00000556993 (KIAA0247-004) 69658510-69703798 retained_intron
ENSG00000100650 (SRSF5)
serine/arginine-rich splicing factor 5 		ENST00000394366 (SRSF5-005) 69767093-69771973 protein_coding
ENST00000553369 (SRSF5-018) 69767112-69769594 protein_coding
ENST00000553521 (SRSF5-003) 69726900-69772004 protein_coding
ENST00000553548 (SRSF5-016) 69767112-69769189 protein_coding
ENST00000553635 (SRSF5-004) 69767157-69771949 protein_coding
ENST00000554021 (SRSF5-010) 69767940-69769644 protein_coding
ENST00000554465 (SRSF5-001) 69767093-69772004 retained_intron
ENST00000554929 (SRSF5-008) 69770881-69771915 retained_intron
ENST00000555349 (SRSF5-011) 69767940-69769383 protein_coding
ENST00000555412 (SRSF5-009) 69767783-69768675 retained_intron
ENST00000555547 (SRSF5-007) 69767186-69771654 nonsense_mediated_decay
ENST00000556184 (SRSF5-006) 69767172-69771642 retained_intron
ENST00000556330 (SRSF5-014) 69769746-69771257 retained_intron
ENST00000556436 (SRSF5-017) 69767240-69768928 retained_intron
ENST00000556587 (SRSF5-019) 69767182-69772005 processed_transcript
ENST00000556647 (SRSF5-013) 69770448-69772005 processed_transcript
ENST00000557154 (SRSF5-002) 69767124-69771991 protein_coding
ENST00000557435 (SRSF5-012) 69767116-69768619 retained_intron
ENST00000557460 (SRSF5-015) 69767175-69771108 retained_intron
ENSG00000273797 (RP11-1046B16.3)
 ENST00000611191 (RP11-1046B16.3-001) 69617122-69617648 sense_intronic
CIL_0002M1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021133-ENSMUSG00000021134 CGP 10090 12:80790532-80950507
GeneTranscriptPositionBiotype
ENSMUSG00000021133 (4933426M11Rik)
RIKEN cDNA 4933426M11 gene 		ENSMUST00000068519 (4933426M11Rik-201) 80790532-80880832 protein_coding
ENSMUSG00000021134 (Srsf5)
serine/arginine-rich splicing factor 5 		ENSMUST00000094693 (Srsf5-201) 80945504-80950507 protein_coding
ENSMUST00000110351 (Srsf5-003) 80945532-80950503 protein_coding
ENSMUST00000110352 (Srsf5-001) 80945532-80950503 protein_coding
ENSMUST00000110354 (Srsf5-009) 80945520-80950503 protein_coding
ENSMUST00000110356 (Srsf5-004) 80945585-80950503 protein_coding
ENSMUST00000125814 (Srsf5-006) 80945548-80948504 processed_transcript
ENSMUST00000133783 (Srsf5-012) 80945520-80950503 retained_intron
ENSMUST00000138434 (Srsf5-010) 80945570-80947528 nonsense_mediated_decay
ENSMUST00000151036 (Srsf5-007) 80946376-80950497 retained_intron
ENSMUST00000151968 (Srsf5-011) 80945579-80946970 processed_transcript
ENSMUST00000152662 (Srsf5-008) 80945534-80946848 processed_transcript
ENSMUST00000153056 (Srsf5-005) 80945532-80950503 retained_intron
ENSMUSG00000097369 (Gm26545)
predicted gene, 26545 		ENSMUST00000181082 (Gm26545-201) 80885549-80887674 lincRNA
ENSMUSG00000101912 (RP23-168F21.1)
RIKEN cDNA 1700052I22 gene 		ENSMUST00000190431 (RP23-168F21.1-001) 80923432-80924449 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M1_0001ENSG00000100647ENST00000342745ENST00000553497ENST00000556993ENSG00000100650ENST00000394366ENST00000553369ENST00000553521ENST00000553548ENST00000553635ENST00000554021ENST00000554465ENST00000554929ENST00000555349ENST00000555412ENST00000555547ENST00000556184ENST00000556330ENST00000556436ENST00000556587ENST00000556647ENST00000557154ENST00000557435ENST00000557460ENSG00000273797ENST00000611191CIL_0002M1_0002ENSMUSG00000021133ENSMUST00000068519ENSMUSG00000021134ENSMUST00000094693ENSMUST00000110351ENSMUST00000110352ENSMUST00000110354ENSMUST00000110356ENSMUST00000125814ENSMUST00000133783ENSMUST00000138434ENSMUST00000151036ENSMUST00000151968ENSMUST00000152662ENSMUST00000153056ENSMUSG00000097369ENSMUST00000181082ENSMUSG00000101912ENSMUST00000190431
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002M1_0001ENSG00000100647ENST00000342745ENST00000556993ENSG00000100650ENST00000394366ENST00000553369ENST00000553548ENST00000553635ENST00000554465ENST00000555547ENST00000556184ENST00000556330ENST00000556587ENST00000556647ENST00000557154ENSG00000273797ENST00000611191CIL_0002M1_0002ENSMUSG00000021133ENSMUST00000068519ENSMUSG00000021134ENSMUST00000094693ENSMUST00000110351ENSMUST00000110352ENSMUST00000110356ENSMUST00000125814ENSMUST00000152662ENSMUST00000153056ENSMUSG00000097369ENSMUST00000181082ENSMUSG00000101912ENSMUST00000190431
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100647 ENST00000342745 21.113±0.00 15.799±0.00 3.610±0.00 5.068±2.98 6.758±2.59 5.546±2.35 4.478±2.83 7.666±6.13 2.247±1.10 21.341±16.89 3.520±2.20 7.947±2.48 7.423±0.86 9.711±0.30
ENST00000553497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556993 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.536±0.00 N/A N/A N/A
ENSG00000100650 ENST00000394366 N/A N/A N/A 45.639±0.00 N/A N/A N/A N/A N/A 16.103±0.00 3.322±0.00 32.970±0.00 N/A N/A
ENST00000553369 53.480±0.00 130.681±0.00 N/A 162.545±0.00 N/A 11.757±0.00 27.806±0.00 N/A N/A N/A N/A 32.776±0.00 49.647±0.00 32.042±0.00
ENST00000553521 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553548 N/A N/A 33.574±0.00 24.285±0.00 N/A N/A 10.897±0.00 N/A 44.350±0.00 N/A N/A 46.304±19.72 92.236±0.00 174.729±0.00
ENST00000553635 N/A N/A N/A N/A N/A N/A 13.742±0.00 N/A 11.668±0.00 N/A N/A 29.772±0.00 10.278±2.98 N/A
ENST00000554021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554465 N/A N/A N/A N/A N/A 6.373±0.00 N/A N/A N/A 10.217±0.00 N/A N/A N/A N/A
ENST00000554929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555547 N/A N/A N/A N/A N/A 2.034±0.00 8.563±0.00 N/A 6.583±0.00 15.473±0.00 2.999±0.27 32.298±8.02 6.903±0.33 61.825±0.00
ENST00000556184 7.198±0.00 N/A 19.945±0.00 14.185±0.00 17.920±5.59 14.406±11.68 5.846±1.18 18.252±1.37 20.770±0.00 21.585±11.77 N/A 15.932±2.72 4.157±0.00 17.747±11.81
ENST00000556330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.349±1.03 N/A N/A N/A
ENST00000556436 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556587 N/A N/A N/A N/A N/A 2.621±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556647 35.292±0.00 118.958±0.00 N/A 64.606±41.03 67.017±0.00 9.043±0.00 22.687±0.00 44.403±13.58 36.509±0.00 47.131±0.00 9.426±2.85 104.816±0.00 26.613±2.06 30.067±0.00
ENST00000557154 25.645±0.00 63.846±0.00 N/A 7.888±0.00 27.781±12.71 2.727±0.00 3.516±0.00 20.545±0.00 7.913±0.00 N/A 2.266±0.00 40.936±28.85 14.010±1.41 15.435±0.00
ENST00000557435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273797 ENST00000611191 0.461±0.00 0.271±0.00 N/A 0.136±0.04 0.517±0.43 0.909±0.81 0.544±0.33 0.147±0.00 0.049±0.00 0.543±0.11 N/A 0.192±0.21 0.076±0.00 0.186±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021133 ENSMUST00000068519 15.517±3.52 26.657±0.90 14.890±6.88 5.074±2.68 21.493±3.66 38.729±2.99 21.702±0.70 31.483±3.93 9.916±2.11 45.084±7.05 16.061±0.76 30.016±8.69 13.553±10.24 13.868±6.66
ENSMUSG00000021134 ENSMUST00000094693 56.990±13.46 47.812±12.94 75.364±7.62 54.498±14.62 35.681±3.34 53.098±12.32 22.479±6.09 44.472±6.22 58.916±30.80 69.182±11.15 21.766±6.21 103.147±25.00 49.046±10.46 38.085±7.72
ENSMUST00000110351 N/A 52.850±9.00 N/A N/A N/A 35.099±5.41 N/A N/A 34.037±9.28 N/A 15.087±0.00 N/A 22.124±0.00 N/A
ENSMUST00000110352 N/A N/A N/A N/A N/A N/A 35.304±0.00 N/A N/A N/A 26.454±0.00 53.562±0.00 37.200±0.00 N/A
ENSMUST00000110354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000110356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.028±0.00 N/A N/A N/A
ENSMUST00000125814 74.859±13.49 81.505±9.57 172.430±23.44 141.160±75.49 108.255±11.84 100.831±19.97 70.363±13.80 99.005±4.48 115.075±14.77 200.450±5.92 32.715±2.03 190.263±112.52 136.609±90.17 106.837±86.71
ENSMUST00000133783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151036 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152662 71.899±5.98 33.919±0.00 N/A N/A 54.132±2.56 53.005±3.62 N/A N/A N/A 108.859±9.90 N/A 125.193±33.54 N/A 86.837±49.76
ENSMUST00000153056 51.148±9.72 43.369±4.96 154.921±39.49 53.788±35.31 45.016±4.61 48.903±3.14 20.009±5.91 35.974±4.30 74.143±39.51 81.915±7.81 17.403±3.51 69.220±19.46 34.658±18.15 26.142±3.60
ENSMUSG00000097369 ENSMUST00000181082 0.043±0.01 0.092±0.03 0.009±0.00 0.028±0.00 0.046±0.02 0.105±0.00 0.019±0.00 0.030±0.01 0.017±0.01 0.038±0.01 N/A 0.187±0.17 0.023±0.01 0.126±0.14
ENSMUSG00000101912 ENSMUST00000190431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.425±7.25

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