C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STE20-related kinase adaptor beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152318 Stradb-008 ENSMUSG00000026027 10090 + 1:58991058-58994359 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000152318
Transcript ID Brain Ovary Placenta
ENSMUST00000152318 11.153±0.00 5.776±0.00 9.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089O CIL_00089O_0002 VISTA 1:58652904-59256413
CIL_0000JJ CIL_0000JJ_0003 CGP 1:58900449-58995715
CIL_00020Q CIL_00020Q_0002 CGP 1:58973522-59094900

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000194530 STRADB-001 protein_coding Homo_sapiens 0 542
ENST00000392249 STRADB-003 protein_coding Homo_sapiens 0 542
ENST00000412769 RP11-329A14.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000415688 STRADB-009 protein_coding Homo_sapiens 0 268
ENST00000458269 STRADB-006 protein_coding Homo_sapiens 0 431
ENST00000468123 STRADB-008 retained_intron Homo_sapiens 0 534
ENST00000478954 STRADBP1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000484098 STRADB-011 retained_intron Homo_sapiens 0 272
ENST00000498648 STRADB-007 retained_intron Homo_sapiens 0 542

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