C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160683 Psma3-004 ENSMUSG00000060073 10090 + 12:70974671-70994501 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160683 9.471±1.76 13.471±1.67 58.923±5.95 22.284±14.00 12.979±4.39 7.797±2.63 9.425±0.83 11.315±2.63 32.644±23.00 12.976±2.39 26.470±3.31 18.275±6.59 39.843±16.24 15.566±2.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001K7 CIL_0001K7_0002 CGP 12:70937857-70996347
CIL_0004LX CIL_0004LX_0002 CGP 12:70974621-71098592

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000130105 psma3-001 protein_coding Danio_rerio 0 320
ENST00000216455 PSMA3-001 protein_coding Homo_sapiens 0 625
ENST00000412908 PSMA3-002 protein_coding Homo_sapiens 0 499
ENST00000424879 RP4-580O19.2-001 processed_pseudogene Homo_sapiens 0 359
ENST00000553665 PSMA3-008 retained_intron Homo_sapiens 0 466
ENST00000553677 PSMA3-007 protein_coding Homo_sapiens 0 272
ENST00000554812 PSMA3-006 retained_intron Homo_sapiens 0 438
ENST00000555743 PSMA3-016 retained_intron Homo_sapiens 0 466
ENST00000555931 PSMA3-011 nonsense_mediated_decay Homo_sapiens 0 438
ENST00000556321 PSMA3-015 retained_intron Homo_sapiens 0 492
ENST00000557087 PSMA3-012 nonsense_mediated_decay Homo_sapiens 0 549
ENST00000557290 PSMA3-004 retained_intron Homo_sapiens 0 272
ENST00000557508 PSMA3-013 protein_coding Homo_sapiens 0 625

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