C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | glypican 2 (cerebroglycan) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000161984  |
Gpc2-002 |
ENSMUSG00000029510 |
10090 | - |
5:138273657-138279982  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008QI | CIL_0008QI_0002 | VISTA | 5:137705744-138314172 |
| CIL_0005BN | CIL_0005BN_0003 | CGP | 5:138259658-138272840 |
| CIL_0005CG | CIL_0005CG_0002 | CGP | 5:138264921-138280005 |
| CIL_0005CH | CIL_0005CH_0002 | CGP | 5:138264952-138312393 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005578 | IEA | proteinaceous extracellular matrix |
| GO:0005886 | IEA | plasma membrane |
| GO:0031225 | IEA | anchored component of membrane |
| GO:0043395 | IEA | heparan sulfate proteoglycan binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000292377
|
GPC2-001 | protein_coding | Homo_sapiens | 0 | 1561 |
|
ENST00000471050
|
GPC2-003 | processed_transcript | Homo_sapiens | 0 | 761 |
|
ENST00000471717
|
GPC2-002 | retained_intron | Homo_sapiens | 0 | 865 |
|
ENST00000480087
|
GPC2-005 | processed_transcript | Homo_sapiens | 0 | 449 |
|
ENST00000482569
|
GPC2-009 | processed_transcript | Homo_sapiens | 0 | 429 |
|
ENST00000490629
|
GPC2-007 | retained_intron | Homo_sapiens | 0 | 617 |
