C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 17149
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164712 Gm17149-001 ENSMUSG00000090334 10090 - 8:18656615-18656989 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000164712
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000164712 0.298±0.15 0.091±0.01 0.294±0.06 1.191±0.85 0.245±0.09 0.264±0.10 0.106±0.04 0.464±0.15 0.886±0.55 0.338±0.28 0.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LC CIL_0000LC_0002 CGP 8:15892537-18803189
CIL_0008KU CIL_0008KU_0002 VISTA 8:18411246-19012747
CIL_00006Z CIL_00006Z_0003 CGP 8:18595131-18803189

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316788 AP3S1-001 protein_coding Homo_sapiens 0 479
ENST00000395548 AP3S1-003 retained_intron Homo_sapiens 0 479
ENST00000432577 RP11-365D23.4-001 processed_pseudogene Homo_sapiens 0 448
ENST00000505423 AP3S1-006 processed_transcript Homo_sapiens 0 217
ENST00000506430 AP3S1-008 nonsense_mediated_decay Homo_sapiens 0 267
ENST00000507436 AP3S1-007 retained_intron Homo_sapiens 1e-22 110
ENST00000515066 AP3S1-002 retained_intron Homo_sapiens 1e-39 169

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