C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165602 Atp2b4-202 ENSMUSG00000026463 10090 - 1:133702674-133753747 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165602
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165602 18.978±1.29 2.595±0.14 4.385±0.00 5.227±0.96 5.395±1.23 2.303±0.25 2.450±0.31 7.168±8.32 4.242±0.48 1.557±0.18 6.471±2.41 3.169±1.62 7.959±2.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719
CIL_0005VX CIL_0005VX_0002 CGP 1:133699457-133907999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005887 TAS integral component of plasma membrane
GO:0006816 TAS calcium ion transport
GO:0008152 IEA metabolic process
GO:0030315 IDA T-tubule
GO:0042383 IDA sarcolemma
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport
GO:1903243 IMP negative regulation of cardiac muscle hypertrophy in response to stress

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 1461
ENST00000341360 ATP2B4-002 protein_coding Homo_sapiens 0 3770
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 1461
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1164
ENST00000357681 ATP2B4-001 protein_coding Homo_sapiens 0 3893
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 1458
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1164
ENST00000367218 ATP2B4-201 protein_coding Homo_sapiens 0 3784
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 1151
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1164
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 1151
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1164
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 1424
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1160
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 261
ENST00000484746 ATP2B4-003 nonsense_mediated_decay Homo_sapiens 0 556

Loading