C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: synaptotagmin binding, cytoplasmic RNA interacting protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174145 Syncrip-011 ENSMUSG00000032423 10090 - 9:88464601-88480744 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007K0 CIL_0007K0_0002 UCNEbase 9:87376892-88455782
CIL_0007TL CIL_0007TL_0002 VISTA 9:87895357-88499255
CIL_0005XI CIL_0005XI_0002 CGP 9:88376750-88456616
CIL_0005XJ CIL_0005XJ_0002 CGP 9:88407432-88482574

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355238 SYNCRIP-002 protein_coding Homo_sapiens 0 632
ENST00000369622 SYNCRIP-001 protein_coding Homo_sapiens 0 632
ENST00000434910 RP4-775C13.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000444272 SYNCRIP-003 protein_coding Homo_sapiens 0 632
ENST00000616122 SYNCRIP-201 protein_coding Homo_sapiens 0 385

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