C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005XJ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000271793-ENSG00000135316 | CGP | 9606 | 6:85557978-85643792  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000135316  (SYNCRIP)synaptotagmin binding, cytoplasmic RNA interacting protein |
ENST00000355238 (SYNCRIP-002)
|
85608329-85642991 | protein_coding | |
|
ENST00000369622 (SYNCRIP-001)
|
85614106-85643285 | protein_coding | ||
|
ENST00000444272 (SYNCRIP-003)
|
85637078-85643792 | protein_coding | ||
|
ENST00000616122 (SYNCRIP-201)
|
85607785-85642922 | protein_coding | ||
|
ENSG00000135317 (SNX14) sorting nexin 14 |
ENST00000314673 (SNX14-002)
|
85505499-85593895 | protein_coding | |
|
ENST00000346348 (SNX14-001)
|
85505496-85593913 | protein_coding | ||
|
ENST00000369627 (SNX14-008)
|
85505802-85593850 | protein_coding | ||
|
ENST00000369635 (SNX14-005)
|
85513857-85593785 | nonsense_mediated_decay | ||
|
ENST00000418862 (SNX14-004)
|
85508007-85528351 | protein_coding | ||
|
ENST00000474645 (SNX14-003)
|
85505798-85508457 | retained_intron | ||
|
ENST00000503491 (SNX14-012)
|
85505806-85568483 | retained_intron | ||
|
ENST00000503608 (SNX14-019)
|
85517569-85533680 | retained_intron | ||
|
ENST00000504191 (SNX14-016)
|
85547402-85549758 | retained_intron | ||
|
ENST00000505648 (SNX14-009)
|
85505798-85594156 | protein_coding | ||
|
ENST00000506182 (SNX14-017)
|
85528264-85543787 | retained_intron | ||
|
ENST00000508658 (SNX14-020)
|
85507208-85514613 | protein_coding | ||
|
ENST00000508980 (SNX14-006)
|
85505799-85581846 | processed_transcript | ||
|
ENST00000509338 (SNX14-013)
|
85549789-85593885 | protein_coding | ||
|
ENST00000513865 (SNX14-007)
|
85505793-85593805 | protein_coding | ||
|
ENST00000513869 (SNX14-014)
|
85549824-85593857 | nonsense_mediated_decay | ||
|
ENST00000514419 (SNX14-015)
|
85549801-85593871 | protein_coding | ||
|
ENST00000514801 (SNX14-018)
|
85533675-85537024 | retained_intron | ||
|
ENST00000515216 (SNX14-011)
|
85507968-85589693 | protein_coding | ||
| CIL_0005XJ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000092541-ENSMUSG00000032423 | CGP | 10090 | 9:88407432-88482574 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000032422 (Snx14) sorting nexin 14 |
ENSMUST00000126405 (Snx14-003)
|
88381539-88438929 | nonsense_mediated_decay | |
|
ENSMUST00000126563 (Snx14-004)
|
88419698-88438912 | retained_intron | ||
|
ENSMUST00000140439 (Snx14-002)
|
88376752-88398621 | retained_intron | ||
|
ENSMUST00000165315 (Snx14-001)
|
88376750-88438951 | protein_coding | ||
|
ENSMUST00000173011 (Snx14-007)
|
88376752-88438898 | protein_coding | ||
|
ENSMUST00000173039 (Snx14-005)
|
88376764-88438958 | protein_coding | ||
|
ENSMUST00000174806 (Snx14-006)
|
88376767-88438914 | protein_coding | ||
|
ENSMUST00000187610 (Snx14-008)
|
88392206-88394474 | retained_intron | ||
|
ENSMUSG00000032423 (Syncrip) synaptotagmin binding, cytoplasmic RNA interacting protein |
ENSMUST00000069221 (Syncrip-001)
|
88449739-88482559 | protein_coding | |
|
ENSMUST00000172508 (Syncrip-009)
|
88479662-88482574 | protein_coding | ||
|
ENSMUST00000172828 (Syncrip-005)
|
88453938-88482149 | nonsense_mediated_decay | ||
|
ENSMUST00000173405 (Syncrip-010)
|
88476866-88481169 | protein_coding | ||
|
ENSMUST00000173801 (Syncrip-002)
|
88455578-88482555 | protein_coding | ||
|
ENSMUST00000174145 (Syncrip-011)
|
88464601-88480744 | retained_intron | ||
|
ENSMUST00000174269 (Syncrip-006)
|
88452640-88482131 | protein_coding | ||
|
ENSMUST00000174282 (Syncrip-003)
|
88452689-88482196 | protein_coding | ||
|
ENSMUST00000174361 (Syncrip-008)
|
88456138-88480753 | protein_coding | ||
|
ENSMUST00000174391 (Syncrip-004)
|
88449731-88482248 | protein_coding | ||
|
ENSMUST00000174688 (Syncrip-007)
|
88452437-88480765 | protein_coding | ||
|
ENSMUST00000187770 (Syncrip-012)
|
88478723-88481224 | retained_intron | ||
|
ENSMUSG00000101335 (RP24-286H7.4) predicted gene 28229 |
ENSMUST00000188747 (RP24-286H7.4-001)
|
88441500-88443652 | sense_intronic | |
Expression Patterns
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