Transcript ID | Adipose | Adrenal | Brain | Breast | Heart | Kidney | Liver | Lung | Muscle | Ovary |
---|---|---|---|---|---|---|---|---|---|---|
ENST00000616122 | 3.132±0.00 | 3.844±0.00 | 2.693±0.00 | 3.383±0.00 | 0.855±0.00 | 2.489±0.00 | 4.791±0.00 | 2.168±0.00 | 1.857±0.00 | 5.843±1.17 |
Transcript Info |
||||||
Description: | synaptotagmin binding, cytoplasmic RNA interacting protein | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000616122 | SYNCRIP-201 | ENSG00000135316 | 9606 | - | 6:85607785-85642922 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0007K0 | CIL_0007K0_0001 | UCNEbase | 6:84361462-85614404 |
CIL_0005XI | CIL_0005XI_0001 | CGP | 6:85505496-85615234 |
CIL_0005XJ | CIL_0005XJ_0001 | CGP | 6:85557978-85643792 |
CIL_0006BO | CIL_0006BO_0002 | CGP | 6:85607785-87016683 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0003676 | IEA | nucleic acid binding |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000174391 | Syncrip-004 | protein_coding | Mus_musculus | 0 | 7252 |
ENSMUST00000069221 | Syncrip-001 | protein_coding | Mus_musculus | 0 | 7090 |
ENSMUST00000174282 | Syncrip-003 | protein_coding | Mus_musculus | 0 | 5053 |
ENSMUST00000174688 | Syncrip-007 | protein_coding | Mus_musculus | 0 | 4034 |
ENSMUST00000174269 | Syncrip-006 | protein_coding | Mus_musculus | 0 | 3784 |
ENSMUST00000172828 | Syncrip-005 | nonsense_mediated_decay | Mus_musculus | 0 | 2953 |
ENSMUST00000173801 | Syncrip-002 | protein_coding | Mus_musculus | 0 | 2451 |
ENSMUST00000187178 | RP24-512H17.5-001 | processed_pseudogene | Mus_musculus | 0 | 1242 |
ENSMUST00000174361 | Syncrip-008 | protein_coding | Mus_musculus | 0 | 1229 |
ENSDART00000129870 | syncrip-201 | protein_coding | Danio_rerio | 0 | 761 |
ENSDART00000058779 | syncrip-001 | protein_coding | Danio_rerio | 0 | 761 |
ENSMUST00000173405 | Syncrip-010 | protein_coding | Mus_musculus | 0 | 730 |
ENSMUST00000173131 | Gm20537-001 | nonsense_mediated_decay | Mus_musculus | 0 | 604 |
ENSDART00000132186 | syncrip-002 | protein_coding | Danio_rerio | 0 | 545 |
ENSMUST00000154586 | Gm20537-002 | nonsense_mediated_decay | Mus_musculus | 0 | 392 |
ENSMUST00000187770 | Syncrip-012 | retained_intron | Mus_musculus | 0 | 387 |
ENSMUST00000174145 | Syncrip-011 | retained_intron | Mus_musculus | 0 | 385 |
ENSMUST00000172508 | Syncrip-009 | protein_coding | Mus_musculus | 0 | 233 |