C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9, pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000174221 Rpl9-ps5-001 ENSMUSG00000092485 10090 + 17:36657056-36657626 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000420 CIL_000420_0005 CGP 17:36639285-36672219

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 540
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 540
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 545
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 392
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 326
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 540
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 457
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 460
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 545
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 0 451
ENST00000489849 RP11-124G5.1-001 processed_pseudogene Homo_sapiens 0 226
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 457
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 479
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 475
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 479
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 387
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 289

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