C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418824 UBE2Q2P6-002 ENSG00000237550 9606 - 15:82372196-82372912 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLungOvaryPlacentaTestisENST00000418824
Transcript ID Adrenal Brain Breast Kidney Lung Ovary Placenta Testis
ENST00000418824 3.757±0.00 0.738±0.00 1.527±0.50 2.387±0.00 5.087±0.00 14.699±13.95 0.912±0.10 0.989±0.71

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057885 Rpl9-001 protein_coding Mus_musculus 0 529
ENSMUST00000118543 Rpl9-006 protein_coding Mus_musculus 0 523
ENSMUST00000078034 Rpl9-ps6-201 protein_coding Mus_musculus 0 523
ENSMUST00000120094 Rpl9-007 protein_coding Mus_musculus 0 514
ENSMUST00000147660 Rpl9-004 retained_intron Mus_musculus 0 512
ENSMUST00000140507 Rpl9-ps7-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000075549 Rpl9-ps4-201 processed_pseudogene Mus_musculus 0 503
ENSMUST00000080545 Gm5451-201 processed_pseudogene Mus_musculus 0 497
ENSMUST00000119147 Rpl9-ps3-001 processed_pseudogene Mus_musculus 0 481
ENSMUST00000117749 Gm11462-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000182502 Rpl9-ps1-002 protein_coding Mus_musculus 0 460
ENSMUST00000117199 Rpl9-ps1-001 translated_processed_pseudogene Mus_musculus 0 460
ENSMUST00000120821 Rpl9-ps2-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000077111 RP23-4E15.2-001 processed_pseudogene Mus_musculus 0 446
ENSMUST00000121601 Gm12110-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000120090 Gm14231-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000118644 Gm8662-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000119091 Gm8087-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000061905 Gm20445-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000174221 Rpl9-ps5-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000120661 Gm9159-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000118836 Gm12741-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000173020 Gm5227-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000150815 Rpl9-005 retained_intron Mus_musculus 0 318
ENSMUST00000128074 Rpl9-002 retained_intron Mus_musculus 0 318
ENSMUST00000127874 Rpl9-003 protein_coding Mus_musculus 0 294
ENSMUST00000120283 Gm14927-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000190216 RP23-347F2.3-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000121372 Gm14732-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000122349 Gm12738-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000117292 Gm15516-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000117730 Gm7206-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000140879 Rpl9-010 retained_intron Mus_musculus 0 195
ENSMUST00000129885 Gm14562-001 processed_pseudogene Mus_musculus 9.99995e-41 171
ENSMUST00000147966 Rpl9-009 retained_intron Mus_musculus 4e-30 135
ENSMUST00000151917 Rpl9-008 retained_intron Mus_musculus 4e-30 135
ENSMUST00000117594 Gm12795-001 processed_pseudogene Mus_musculus 1e-19 100

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