C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene, 21963
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000179519 Gm21963-201 ENSMUSG00000095895 10090 + 13:62778782-62779117 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000179519
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000179519 0.513±0.42 0.447±0.00 0.115±0.02 0.459±0.05 0.454±0.20 0.469±0.00 0.298±0.10 0.207±0.02 0.120±0.09 0.408±0.08 1.396±1.01 0.176±0.10 0.442±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341369 PTMA-002 protein_coding Homo_sapiens 0 385
ENST00000397729 PTMAP8-001 processed_pseudogene Homo_sapiens 0 296
ENST00000409115 PTMA-001 protein_coding Homo_sapiens 0 375
ENST00000409321 PTMA-012 protein_coding Homo_sapiens 0 370
ENST00000409683 PTMA-007 protein_coding Homo_sapiens 0 324
ENST00000410064 PTMA-004 protein_coding Homo_sapiens 0 342
ENST00000411648 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000412128 PTMA-008 protein_coding Homo_sapiens 0 340
ENST00000442851 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000444251 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000447774 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000448874 PTMA-011 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000455552 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000456700 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000457022 PTMAP1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000466801 PTMA-013 processed_transcript Homo_sapiens 0 340
ENST00000467816 PTMA-010 retained_intron Homo_sapiens 0 206
ENST00000468027 PTMA-006 retained_intron Homo_sapiens 0 315
ENST00000481928 PTMA-003 retained_intron Homo_sapiens 0 285
ENST00000612829 PTMA-201 protein_coding Homo_sapiens 0 337

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