C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9625
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180422 Gm9625-001 ENSMUSG00000097906 10090 + 13:67810246-67811200 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000180422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000180422 49.883±22.01 34.940±1.55 3.359±3.15 1.396±0.88 78.166±27.48 54.906±52.93 11.267±9.99 45.126±1.50 15.084±13.34 20.493±18.45 0.152±0.06 76.252±42.72 0.121±0.05 27.001±15.94

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228306 RPLP0-201 protein_coding Homo_sapiens 0 1253
ENST00000313104 RPLP0-003 protein_coding Homo_sapiens 0 645
ENST00000392514 RPLP0-001 protein_coding Homo_sapiens 0 1253
ENST00000394878 RPLP0P6-001 processed_pseudogene Homo_sapiens 0 1214
ENST00000445179 RP1-140J1.4-001 processed_pseudogene Homo_sapiens 0 795
ENST00000448115 RP11-302I18.1-001 processed_pseudogene Homo_sapiens 0 915
ENST00000459899 RP11-561B11.1-001 processed_pseudogene Homo_sapiens 0 905
ENST00000461635 RP11-436J20.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000471253 RP11-133K1.1-001 processed_pseudogene Homo_sapiens 0 948
ENST00000546564 RPLP0-022 retained_intron Homo_sapiens 0 647
ENST00000546989 RPLP0-008 protein_coding Homo_sapiens 0 643
ENST00000546990 RPLP0-025 protein_coding Homo_sapiens 0 527
ENST00000547173 RPLP0-026 nonsense_mediated_decay Homo_sapiens 0 643
ENST00000547191 RPLP0-014 protein_coding Homo_sapiens 0 604
ENST00000547211 RPLP0-019 protein_coding Homo_sapiens 0 854
ENST00000547475 RPLP0-027 nonsense_mediated_decay Homo_sapiens 0 592
ENST00000548495 RPLP0-012 retained_intron Homo_sapiens 0 296
ENST00000548551 RPLP0-011 retained_intron Homo_sapiens 0 396
ENST00000548568 RPLP0-016 retained_intron Homo_sapiens 0 448
ENST00000549098 RPLP0-013 nonsense_mediated_decay Homo_sapiens 0 1203
ENST00000549242 RPLP0-010 retained_intron Homo_sapiens 0 348
ENST00000550296 RPLP0-020 processed_transcript Homo_sapiens 0 643
ENST00000550423 RPLP0-015 protein_coding Homo_sapiens 0 425
ENST00000550856 RPLP0-009 protein_coding Homo_sapiens 0 963
ENST00000551150 RPLP0-002 protein_coding Homo_sapiens 0 1253
ENST00000551217 RPLP0-007 retained_intron Homo_sapiens 0 220
ENST00000551258 RPLP0-024 nonsense_mediated_decay Homo_sapiens 0 1068
ENST00000551336 RPLP0-017 processed_transcript Homo_sapiens 4e-18 95
ENST00000551783 RPLP0-018 retained_intron Homo_sapiens 0 348
ENST00000551914 RPLP0-021 protein_coding Homo_sapiens 0 470
ENST00000552292 RPLP0-006 protein_coding Homo_sapiens 0 381
ENST00000552461 RPLP0-004 retained_intron Homo_sapiens 0 1158
ENST00000552902 RPLP0-023 retained_intron Homo_sapiens 0 647

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