C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448115 RP11-302I18.1-001 ENSG00000232883 9606 - 1:220316667-220317599 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000448115
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000448115 0.173±0.00 0.497±0.00 0.040±0.00 0.154±0.00 0.367±0.00 0.065±0.00 0.186±0.00 0.293±0.00 0.260±0.00 0.467±0.00 0.052±0.00 0.097±0.00 0.117±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086519 Rplp0-001 protein_coding Mus_musculus 0 924
ENSMUST00000076373 Gm8730-201 protein_coding Mus_musculus 0 918
ENSMUST00000180422 Gm9625-001 processed_pseudogene Mus_musculus 0 915
ENSMUST00000121456 Gm14165-001 processed_pseudogene Mus_musculus 0 889
ENSMUST00000122125 Rplp0-ps1-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000145890 Gucd1-002 nonsense_mediated_decay Mus_musculus 0 660
ENSMUST00000152976 Rplp0-002 protein_coding Mus_musculus 0 479
ENSMUST00000155584 Rplp0-003 retained_intron Mus_musculus 0 364
ENSMUST00000118250 Gm8595-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000118929 Gm15355-001 processed_pseudogene Mus_musculus 6e-40 169
ENSMUST00000163928 Gm8338-001 processed_pseudogene Mus_musculus 1e-37 161

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