C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7784
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000180769 Gm7784-001 ENSMUSG00000097920 10090 + 1:23479539-23480527 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyENSMUST00000180769
Transcript ID Adipose Bladder Brain Colon Kidney
ENSMUST00000180769 0.030±0.00 0.003±0.00 0.008±0.00 0.067±0.00 0.071±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053Y CIL_00053Y_0002 CGP 1:23366424-23849158

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 861
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 702
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 857
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 861
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 861
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 599
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 715
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 641
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 784
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 669
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 693
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 401
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 477
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 558
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 510
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 507
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 560
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 809
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 8.00001e-41 172
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 702
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 702
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 388
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 593
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 680
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 682
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 200
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 3.99931e-42 176
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 665
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 460
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 512
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 582
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 508
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 508
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 322
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 785

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