C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 9034
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182071 Gm9034-001 ENSMUSG00000094852 10090 + 10:43821231-43822235 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000182071
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000182071 0.061±0.03 0.072±0.00 0.015±0.01 0.001±0.00 0.202±0.21 0.068±0.00 0.071±0.03 0.066±0.04 0.026±0.03 0.047±0.02 0.150±0.00 0.008±0.00 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085F CIL_00085F_0002 VISTA 10:43422435-44024831
CIL_0008PN CIL_0008PN_0002 VISTA 10:43446138-44046678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 342
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1066
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 833
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1046
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1066
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1066
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 869
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 782
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 891
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 726
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 950
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 798
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 630
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 713
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 616
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 4e-22 106
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 702
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1013
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 501
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 833
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 833
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 490
ENST00000491037 GAPDHP22-001 processed_pseudogene Homo_sapiens 0 204
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 756
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 798
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 835
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 309
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 857
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 863
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 542
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 771
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 953

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