C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8318
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182954 Gm8318-001 ENSMUSG00000098222 10090 + 15:18163886-18164752 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000182954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000182954 0.271±0.00 0.068±0.01 0.099±0.00 0.070±0.05 0.037±0.00 0.122±0.00 0.412±0.35 0.199±0.09 0.092±0.03 0.040±0.00 0.447±0.12 0.101±0.04 0.111±0.03 0.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0004 CGP 15:16778101-19014236

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 970
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 885
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 970
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 970
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 970
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 769
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 819
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 215
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 675
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 859
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 730
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 448
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 597
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 662
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 481
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 573
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 911
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 660
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 551
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 885
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 885
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 453
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 647
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 723
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 785
ENST00000509132 GAPDHP66-001 processed_pseudogene Homo_sapiens 0 525
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 747
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 745
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 761
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 479
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 693
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 693
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 693
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 442
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 970

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