C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000182329-ENSG00000116030 CGP 9606 2:202073255-202238608
GeneTranscriptPositionBiotype
ENSG00000116030 (SUMO1)
small ubiquitin-like modifier 1 		ENST00000392244 (SUMO1-007) 202206768-202238566 protein_coding
ENST00000392245 (SUMO1-201) 202206187-202238599 protein_coding
ENST00000392246 (SUMO1-001) 202206180-202238608 protein_coding
ENST00000409181 (SUMO1-005) 202206870-202238569 protein_coding
ENST00000409205 (SUMO1-010) 202207031-202238462 protein_coding
ENST00000409368 (SUMO1-002) 202206650-202238594 protein_coding
ENST00000409498 (SUMO1-003) 202207008-202238586 protein_coding
ENST00000409627 (SUMO1-006) 202207142-202238566 nonsense_mediated_decay
ENST00000409712 (SUMO1-004) 202206851-202238576 protein_coding
ENST00000469034 (SUMO1-008) 202207246-202222006 processed_transcript
ENSG00000182329 (AC079354.1)
KIAA2012 		ENST00000409515 (AC079354.1-001) 202073289-202154756 processed_transcript
ENST00000459709 (AC079354.1-002) 202073289-202109664 processed_transcript
ENST00000469462 (AC079354.1-003) 202135716-202197862 retained_intron
ENST00000498697 (AC079354.1-004) 202100435-202194351 protein_coding
ENST00000541917 (AC079354.1-201) 202073255-202197163 protein_coding
ENSG00000222035 (AC079354.3)
 ENST00000409819 (AC079354.3-001) 202113626-202117058 antisense
ENSG00000223825 (DAZAP2P1)
DAZ associated protein 2 pseudogene 1 		ENST00000475212 (DAZAP2P1-001) 202201384-202201886 processed_pseudogene
ENSG00000227890 (PSMA2P3)
proteasome (prosome, macropain) subunit, alpha type, 2 pseudogene 3 		ENST00000429685 (PSMA2P3-001) 202179297-202179971 processed_pseudogene
ENSG00000231903 (AC079354.5)
 ENST00000447111 (AC079354.5-001) 202178660-202179391 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_00020U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000047361-ENSMUSG00000026021 CGP 10090 1:59516264-59670834
GeneTranscriptPositionBiotype
ENSMUSG00000026021 (Sumo1)
SMT3 suppressor of mif two 3 homolog 1 (yeast) 		ENSMUST00000091374 (Sumo1-001) 59639434-59670834 protein_coding
ENSMUST00000123857 (Sumo1-002) 59643996-59670834 retained_intron
ENSMUST00000185265 (Sumo1-004) 59639944-59670739 protein_coding
ENSMUST00000191158 (Sumo1-003) 59586558-59670792 processed_transcript
ENSMUSG00000047361 (Gm973)
predicted gene 973 		ENSMUST00000114243 (Gm973-001) 59516264-59634509 protein_coding
ENSMUST00000185291 (Gm973-005) 59544221-59556294 retained_intron
ENSMUST00000185753 (Gm973-003) 59606816-59630303 processed_transcript
ENSMUST00000186310 (Gm973-006) 59548831-59562791 processed_transcript
ENSMUST00000186434 (Gm973-004) 59524294-59526971 protein_coding
ENSMUST00000187454 (Gm973-002) 59606782-59628261 processed_transcript
ENSMUST00000187979 (Gm973-007) 59558008-59566636 retained_intron
ENSMUST00000190490 (Gm973-008) 59630323-59636417 protein_coding
ENSMUST00000191051 (Gm973-009) 59619414-59628243 processed_transcript
ENSMUSG00000099811 (RP24-421H8.2)
predicted gene 28411 		ENSMUST00000189864 (RP24-421H8.2-002) 59542158-59549521 antisense
ENSMUST00000191318 (RP24-421H8.2-001) 59532991-59548788 antisense
ENSMUSG00000101409 (RP24-421H8.3)
RIKEN cDNA 1700122D07 gene 		ENSMUST00000186973 (RP24-421H8.3-001) 59534811-59537229 antisense

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020U_0001ENSG00000116030ENST00000392244ENST00000392245ENST00000392246ENST00000409181ENST00000409205ENST00000409368ENST00000409498ENST00000409627ENST00000409712ENST00000469034ENSG00000182329ENST00000409515ENST00000459709ENST00000469462ENST00000498697ENST00000541917ENSG00000222035ENST00000409819ENSG00000223825ENST00000475212ENSG00000227890ENST00000429685ENSG00000231903ENST00000447111CIL_00020U_0002ENSMUSG00000026021ENSMUST00000091374ENSMUST00000123857ENSMUST00000185265ENSMUST00000191158ENSMUSG00000047361ENSMUST00000114243ENSMUST00000185291ENSMUST00000185753ENSMUST00000186310ENSMUST00000186434ENSMUST00000187454ENSMUST00000187979ENSMUST00000190490ENSMUST00000191051ENSMUSG00000099811ENSMUST00000189864ENSMUST00000191318ENSMUSG00000101409ENSMUST00000186973
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020U_0001ENSG00000116030ENST00000392244ENST00000392246ENST00000409181ENST00000409368ENSG00000182329ENST00000409515ENST00000459709ENST00000469462ENST00000498697ENST00000541917ENSG00000222035ENST00000409819ENSG00000223825ENST00000475212ENSG00000227890ENST00000429685ENSG00000231903ENST00000447111CIL_00020U_0002ENSMUSG00000026021ENSMUST00000091374ENSMUST00000123857ENSMUSG00000047361ENSMUST00000114243ENSMUSG00000099811ENSMUST00000189864ENSMUST00000191318ENSMUSG00000101409ENSMUST00000186973
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116030 ENST00000392244 18.447±0.00 15.250±0.00 N/A N/A 16.784±0.00 N/A 7.824±0.00 15.001±0.00 N/A 11.722±0.00 5.205±0.00 32.082±0.00 26.070±0.00 18.597±0.00
ENST00000392245 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392246 14.412±0.00 7.599±0.00 5.014±0.00 26.076±4.87 7.510±0.13 5.750±1.44 5.059±2.86 11.019±0.17 4.539±0.95 6.192±0.16 5.621±0.00 17.898±5.86 15.508±8.31 28.244±0.00
ENST00000409181 10.054±0.00 N/A 5.676±0.00 18.729±11.18 2.832±0.00 7.213±0.00 N/A 7.721±0.00 7.979±0.00 N/A 4.694±0.00 6.964±0.00 10.858±0.00 N/A
ENST00000409205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409368 N/A 10.852±0.00 N/A N/A 15.843±0.00 N/A 7.149±0.00 12.340±0.00 3.143±0.00 15.921±0.00 3.077±0.38 106.831±0.00 52.100±0.00 33.689±19.71
ENST00000409498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000182329 ENST00000409515 N/A N/A N/A 0.307±0.11 N/A N/A N/A N/A N/A 0.671±0.36 N/A N/A N/A N/A
ENST00000459709 N/A N/A N/A N/A N/A 0.042±0.03 N/A N/A N/A 0.196±0.00 N/A N/A N/A N/A
ENST00000469462 0.067±0.00 0.138±0.00 N/A 0.026±0.00 0.072±0.01 0.028±0.00 0.019±0.01 0.064±0.00 0.041±0.00 N/A 0.012±0.00 0.075±0.06 N/A 0.222±0.06
ENST00000498697 N/A N/A 0.121±0.00 0.261±0.00 N/A 0.011±0.00 N/A N/A 0.258±0.00 0.752±0.00 N/A 0.674±0.00 N/A 0.259±0.00
ENST00000541917 N/A N/A N/A 0.058±0.00 N/A N/A N/A N/A 0.109±0.00 0.240±0.15 N/A 0.483±0.47 N/A 0.196±0.05
ENSG00000222035 ENST00000409819 0.047±0.00 0.066±0.00 0.052±0.00 0.125±0.00 0.034±0.02 0.047±0.00 0.010±0.00 0.029±0.00 0.035±0.01 0.033±0.02 0.010±0.00 0.022±0.02 N/A 1.216±0.00
ENSG00000223825 ENST00000475212 N/A 0.212±0.00 N/A 0.100±0.00 0.184±0.00 0.083±0.00 N/A N/A 0.036±0.00 0.368±0.33 0.035±0.00 0.058±0.00 N/A 0.278±0.00
ENSG00000227890 ENST00000429685 N/A N/A N/A 0.020±0.00 0.019±0.00 0.054±0.00 0.018±0.00 N/A N/A N/A 0.052±0.00 0.062±0.01 N/A 0.071±0.00
ENSG00000231903 ENST00000447111 N/A N/A N/A 0.062±0.00 N/A N/A N/A N/A 0.052±0.00 N/A 0.156±0.00 0.788±0.45 0.130±0.00 1.494±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026021 ENSMUST00000091374 14.211±1.55 8.629±2.59 60.045±1.53 45.798±15.68 11.836±1.43 9.608±1.79 13.044±1.10 17.320±3.14 26.031±19.59 16.786±1.56 34.161±2.49 18.431±20.81 43.269±10.27 29.413±4.56
ENSMUST00000123857 N/A 3.074±0.00 N/A N/A N/A 6.860±1.53 N/A N/A 1.628±0.00 N/A N/A N/A N/A N/A
ENSMUST00000185265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191158 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000047361 ENSMUST00000114243 N/A 0.202±0.07 4.854±0.49 N/A N/A N/A N/A N/A N/A 0.701±0.09 N/A 2.361±2.78 N/A 6.490±0.53
ENSMUST00000185291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000099811 ENSMUST00000189864 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.232±0.00 N/A 4.618±0.00
ENSMUST00000191318 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.509±0.00
ENSMUSG00000101409 ENSMUST00000186973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.296±0.59

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