C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S4X pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405151 RPS4XP9-001 ENSG00000217404 9606 + 6:126683036-126683847 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungMuscleENST00000405151
Transcript ID Brain Colon Liver Lung Muscle
ENST00000405151 0.063±0.01 0.015±0.00 0.246±0.19 0.163±0.15 0.014±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000033683 Rps4x-001 protein_coding Mus_musculus 0 745
ENSMUST00000119790 Gm13680-001 processed_pseudogene Mus_musculus 0 717
ENSMUST00000165198 Gm9294-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000183728 Gm15013-002 protein_coding Mus_musculus 0 660
ENSMUST00000183537 Gm15013-001 translated_processed_pseudogene Mus_musculus 0 660
ENSMUST00000119478 Gm12852-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000187360 RP24-279G1.1-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000121609 Gm12267-001 processed_pseudogene Mus_musculus 0 411
ENSMUST00000155028 Rps4x-003 retained_intron Mus_musculus 0 388
ENSMUST00000119465 Gm12757-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000152739 Rps4x-002 retained_intron Mus_musculus 5e-40 169

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