C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor AP-2 beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000187754 Tfap2b-002 ENSMUSG00000025927 10090 + 1:19208960-19238083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000187754
Transcript ID Adipose Adrenal Bladder Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000187754 0.010±0.00 0.541±0.10 0.051±0.01 8.058±0.32 1.347±0.24 2.843±0.56 0.007±0.00 0.035±0.01 0.029±0.00 0.033±0.01 0.099±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007MC CIL_0007MC_0006 UCNEbase 1:18307438-19700223
CIL_000813 CIL_000813_0002 VISTA 1:18655282-19257504
CIL_00096L CIL_00096L_0002 VISTA 1:18806734-19407712
CIL_0005MY CIL_0005MY_0002 CGP 1:19103022-19238576
CIL_0005MX CIL_0005MX_0002 CGP 1:19208914-20618064

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319516 TFAP2A-003 protein_coding Homo_sapiens 0 296
ENST00000344788 TFAP2B-002 protein_coding Homo_sapiens 0 987
ENST00000379604 TFAP2A-201 protein_coding Homo_sapiens 0 296
ENST00000379608 TFAP2A-005 protein_coding Homo_sapiens 0 296
ENST00000379613 TFAP2A-001 protein_coding Homo_sapiens 0 296
ENST00000393655 TFAP2B-001 protein_coding Homo_sapiens 0 2185
ENST00000482890 TFAP2A-007 protein_coding Homo_sapiens 0 296
ENST00000488193 TFAP2A-008 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000489228 TFAP2B-003 processed_transcript Homo_sapiens 0 601
ENST00000489805 TFAP2A-011 nonsense_mediated_decay Homo_sapiens 0 296

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