C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489805 TFAP2A-011 ENSG00000137203 9606 - 6:10397410-10412175 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartKidneyOvaryPlacentaTestisENST00000489805
Transcript ID Adrenal Colon Heart Kidney Ovary Placenta Testis
ENST00000489805 0.043±0.00 0.299±0.00 0.013±0.00 0.549±0.53 2.442±0.00 10.300±0.00 1.183±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NC CIL_0007NC_0001 UCNEbase 6:8153140-10408054
CIL_00097A CIL_00097A_0001 VISTA 6:10093642-10694839
CIL_00086X CIL_00086X_0001 VISTA 6:10107199-10709812
CIL_000382 CIL_000382_0001 CGP 6:10393186-10629368

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021787 Tfap2a-201 protein_coding Mus_musculus 0 2174
ENSMUST00000110193 Tfap2a-202 protein_coding Mus_musculus 0 2174
ENSMUST00000064976 Tfap2b-003 protein_coding Mus_musculus 0 296
ENSMUST00000187754 Tfap2b-002 protein_coding Mus_musculus 0 296
ENSMUST00000027059 Tfap2b-001 protein_coding Mus_musculus 0 296
ENSDART00000082346 tfap2a-201 protein_coding Danio_rerio 0 202
ENSDART00000082349 tfap2a-202 protein_coding Danio_rerio 0 202
ENSDART00000082351 tfap2a-203 protein_coding Danio_rerio 0 202

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