C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP58 ribonucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189289 Nop58-007 ENSMUSG00000026020 10090 + 1:59685003-59692688 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverLungOvaryENSMUST00000189289
Transcript ID Adrenal Breast Colon Kidney Liver Lung Ovary
ENSMUST00000189289 26.177±3.87 15.488±8.65 20.039±6.58 4.259±1.54 4.058±0.00 6.690±1.35 22.096±5.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020T CIL_00020T_0002 CGP 1:59586558-59719044
CIL_00020S CIL_00020S_0002 CGP 1:59684971-59879014

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264279 NOP58-001 protein_coding Homo_sapiens 0 307
ENST00000426814 NOP58-006 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000467734 NOP58-007 processed_transcript Homo_sapiens 1e-19 100
ENST00000472050 NOP58-003 processed_transcript Homo_sapiens 0 307
ENST00000478941 NOP58-004 retained_intron Homo_sapiens 0 215
ENST00000488403 NOP58-002 retained_intron Homo_sapiens 0 307
ENST00000492688 NOP58-005 processed_transcript Homo_sapiens 6e-33 145
ENST00000492740 NOP58-009 retained_intron Homo_sapiens 0 213

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