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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | NOP58 ribonucleoprotein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000478941  |
NOP58-004 |
ENSG00000055044 |
9606 | + |
2:202278131-202290372  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00020T | CIL_00020T_0001 | CGP | 2:202206180-202303666 |
| CIL_00020S | CIL_00020S_0001 | CGP | 2:202265716-202567751 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000185368
|
Nop58-008 | retained_intron | Mus_musculus | 0 | 656 |
|
ENSMUST00000189327
|
Nop58-010 | nonsense_mediated_decay | Mus_musculus | 0 | 564 |
|
ENSMUST00000191142
|
Nop58-001 | protein_coding | Mus_musculus | 0 | 383 |
|
ENSMUST00000027174
|
Nop58-002 | protein_coding | Mus_musculus | 0 | 383 |
|
ENSMUST00000189919
|
Nop58-012 | nonsense_mediated_decay | Mus_musculus | 0 | 307 |
|
ENSMUST00000190231
|
Nop58-009 | protein_coding | Mus_musculus | 0 | 289 |
|
ENSMUST00000190759
|
Nop58-006 | retained_intron | Mus_musculus | 0 | 278 |
|
ENSMUST00000189289
|
Nop58-007 | retained_intron | Mus_musculus | 0 | 215 |
|
ENSMUST00000191088
|
Nop58-003 | processed_transcript | Mus_musculus | 0 | 198 |
|
ENSMUST00000190265
|
Nop58-014 | nonsense_mediated_decay | Mus_musculus | 0.00000000000004 | 82 |
