C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NOP58 ribonucleoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000492688 NOP58-005 ENSG00000055044 9606 + 2:202275162-202291051 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyMuscleOvaryENST00000492688
Transcript ID Kidney Muscle Ovary
ENST00000492688 6.967±0.00 2.105±0.00 20.572±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00020T CIL_00020T_0001 CGP 2:202206180-202303666
CIL_00020S CIL_00020S_0001 CGP 2:202265716-202567751

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000191142 Nop58-001 protein_coding Mus_musculus 0 822
ENSMUST00000027174 Nop58-002 protein_coding Mus_musculus 0 822
ENSMUST00000185368 Nop58-008 retained_intron Mus_musculus 0 682
ENSMUST00000189919 Nop58-012 nonsense_mediated_decay Mus_musculus 0 604
ENSMUST00000190759 Nop58-006 retained_intron Mus_musculus 0 418
ENSMUST00000190265 Nop58-014 nonsense_mediated_decay Mus_musculus 0 370
ENSMUST00000189327 Nop58-010 nonsense_mediated_decay Mus_musculus 0 326
ENSMUST00000185772 Nop58-004 protein_coding Mus_musculus 0 261
ENSMUST00000190231 Nop58-009 protein_coding Mus_musculus 1e-34 150
ENSMUST00000189289 Nop58-007 retained_intron Mus_musculus 6e-33 145
ENSMUST00000191088 Nop58-003 processed_transcript Mus_musculus 6e-33 145

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