C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, L type, alpha 1C subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189520 Cacna1c-017 ENSMUSG00000051331 10090 - 6:118593793-119107975 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLungOvaryTestisENSMUST00000189520
Transcript ID Adrenal Breast Colon Kidney Lung Ovary Testis
ENSMUST00000189520 3.142±0.20 0.190±0.00 0.445±0.00 0.127±0.00 1.530±0.03 2.068±0.00 0.141±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000132909 cacna1c-001 protein_coding Danio_rerio 0 2239
ENSDART00000028856 cacna1c-201 protein_coding Danio_rerio 0 2067
ENSDART00000100118 cacna1da-202 protein_coding Danio_rerio 0 641
ENSDART00000089956 cacna1da-201 protein_coding Danio_rerio 0 586
ENSDART00000058276 cacna1da-001 protein_coding Danio_rerio 0 586
ENSDART00000065375 cacna1db-201 protein_coding Danio_rerio 0 431
ENSDART00000011078 CACNA1F (1 of 2)-201 protein_coding Danio_rerio 0 339
ENST00000288139 CACNA1D-001 protein_coding Homo_sapiens 0 580
ENST00000323022 CACNA1F-001 protein_coding Homo_sapiens 0 706
ENST00000327702 CACNA1C-023 protein_coding Homo_sapiens 0 5219
ENST00000335762 CACNA1C-015 protein_coding Homo_sapiens 0 3284
ENST00000344100 CACNA1C-021 protein_coding Homo_sapiens 0 5086
ENST00000347598 CACNA1C-017 protein_coding Homo_sapiens 0 3688
ENST00000350061 CACNA1D-003 protein_coding Homo_sapiens 0 861
ENST00000362061 CACNA1S-001 protein_coding Homo_sapiens 0 776
ENST00000367338 CACNA1S-002 protein_coding Homo_sapiens 0 776
ENST00000376251 CACNA1F-002 protein_coding Homo_sapiens 0 706
ENST00000376265 CACNA1F-007 protein_coding Homo_sapiens 0 706
ENST00000399591 CACNA1C-008 protein_coding Homo_sapiens 0 5219
ENST00000399595 CACNA1C-002 protein_coding Homo_sapiens 0 5086
ENST00000399597 CACNA1C-005 protein_coding Homo_sapiens 0 5227
ENST00000399601 CACNA1C-020 protein_coding Homo_sapiens 0 5219
ENST00000399603 CACNA1C-011 protein_coding Homo_sapiens 0 5049
ENST00000399606 CACNA1C-019 protein_coding Homo_sapiens 0 3688
ENST00000399617 CACNA1C-013 protein_coding Homo_sapiens 0 5049
ENST00000399621 CACNA1C-006 protein_coding Homo_sapiens 0 5086
ENST00000399629 CACNA1C-022 protein_coding Homo_sapiens 0 8538
ENST00000399634 CACNA1C-012 protein_coding Homo_sapiens 0 4909
ENST00000399637 CACNA1C-007 protein_coding Homo_sapiens 0 5219
ENST00000399638 CACNA1C-004 protein_coding Homo_sapiens 0 5374
ENST00000399641 CACNA1C-010 protein_coding Homo_sapiens 0 5042
ENST00000399644 CACNA1C-003 protein_coding Homo_sapiens 0 5360
ENST00000399649 CACNA1C-024 protein_coding Homo_sapiens 0 5086
ENST00000399655 CACNA1C-001 protein_coding Homo_sapiens 0 5086
ENST00000402845 CACNA1C-032 protein_coding Homo_sapiens 0 5227
ENST00000406454 CACNA1C-031 protein_coding Homo_sapiens 0 5049
ENST00000422281 CACNA1D-002 protein_coding Homo_sapiens 0 861
ENST00000465278 CACNA1C-016 protein_coding Homo_sapiens 0 833
ENST00000465934 CACNA1C-025 retained_intron Homo_sapiens 0 667
ENST00000480911 CACNA1C-018 protein_coding Homo_sapiens 0 5221
ENST00000481478 CACNA1D-004 protein_coding Homo_sapiens 0 544
ENST00000483136 CACNA1C-027 processed_transcript Homo_sapiens 3e-36 156
ENST00000491104 CACNA1C-014 processed_transcript Homo_sapiens 0 387
ENST00000492150 CACNA1C-029 retained_intron Homo_sapiens 0 337
ENST00000496818 CACNA1C-026 protein_coding Homo_sapiens 0 562
ENST00000613940 CACNA1C-201 protein_coding Homo_sapiens 0 4446
ENST00000615303 CACNA1C-202 protein_coding Homo_sapiens 0 3085
ENST00000615400 CACNA1C-203 protein_coding Homo_sapiens 0 3085
ENST00000616390 CACNA1C-036 protein_coding Homo_sapiens 0 2992
ENST00000620878 CACNA1C-204 protein_coding Homo_sapiens 0 4305
ENST00000621625 CACNA1C-205 protein_coding Homo_sapiens 0 4615

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